DGA and DVGA learn disentangled graph representations to improve graph analysis.
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In this paper, we propose a novel structure for a cross-modal data association, which is inspired by the recent research on the associative learning structure of the brain. We formulate the cross-modal association in Bayesian inference framework realized by a deep neural network with multiple variational auto-encoders …
Self-supervised VAEs improve data compression and generation.
We introduce the variational graph auto-encoder (VGAE), a framework for unsupervised learning on graph-structured data based on the variational auto-encoder (VAE). This model makes use of latent variables and is capable of learning interpretable latent representations for undirected graphs. We demonstrate this model us…
Unbiased gradient estimation improves VAE performance.
Variational Auto-Encoders (VAEs) have been widely applied for learning compact, low-dimensional latent representations of high-dimensional data. When the correlation structure among data points is available, previous work proposed Correlated Variational Auto-Encoders (CVAEs), which employ a structured mixture model as …
Auto-encoding generative adversarial networks (GANs) combine the standard GAN algorithm, which discriminates between real and model-generated data, with a reconstruction loss given by an auto-encoder. Such models aim to prevent mode collapse in the learned generative model by ensuring that it is grounded in all the ava…
AEVB improves understanding of latent variable models.
This paper proposes a method to train energy-based models using variational auto-encoders for efficient sampling.
Variational Auto-Encoders (VAEs) are capable of learning latent representations for high dimensional data. However, due to the i.i.d. assumption, VAEs only optimize the singleton variational distributions and fail to account for the correlations between data points, which might be crucial for learning latent representa…
Semi-implicit graph variational auto-encoder (SIG-VAE) is proposed to expand the flexibility of variational graph auto-encoders (VGAE) to model graph data. SIG-VAE employs a hierarchical variational framework to enable neighboring node sharing for better generative modeling of graph dependency structure, together with …
The paper evaluates variational auto-encoders using model criticism methods.
The key idea of variational auto-encoders (VAEs) resembles that of traditional auto-encoder models in which spatial information is supposed to be explicitly encoded in the latent space. However, the latent variables in VAEs are vectors, which can be interpreted as multiple feature maps of size 1x1. Such representations…
The increasing amount of data in astronomy provides great challenges for machine learning research. Previously, supervised learning methods achieved satisfactory recognition accuracy for the star-galaxy classification task, based on manually labeled data set. In this work, we propose a novel unsupervised approach for t…
We provide theoretical and empirical evidence that using tighter evidence lower bounds (ELBOs) can be detrimental to the process of learning an inference network by reducing the signal-to-noise ratio of the gradient estimator. Our results call into question common implicit assumptions that tighter ELBOs are better vari…
Paper formalizes and analyzes a new bound for variational inference.
Paper improves VAEs using Monte Carlo methods.
Generative source separation methods such as non-negative matrix factorization (NMF) or auto-encoders, rely on the assumption of an output probability density. Generative Adversarial Networks (GANs) can learn data distributions without needing a parametric assumption on the output density. We show on a speech source se…
The (variational) graph auto-encoder and its variants have been popularly used for representation learning on graph-structured data. While the encoder is often a powerful graph convolutional network, the decoder reconstructs the graph structure by only considering two nodes at a time, thus ignoring possible interaction…
The paper investigates instance-based interpretation methods for VAEs.
DIVA clusters dynamic data without needing cluster count, outperforming baselines.
Enhances graph modeling with hyperbolic geometry and variational inference.
We propose the Wasserstein Auto-Encoder (WAE)---a new algorithm for building a generative model of the data distribution. WAE minimizes a penalized form of the Wasserstein distance between the model distribution and the target distribution, which leads to a different regularizer than the one used by the Variational Aut…
Generative models improve causal effect estimation from observational data.
Variational auto-encoders (VAE) are scalable and powerful generative models. However, the choice of the variational posterior determines tractability and flexibility of the VAE. Commonly, latent variables are modeled using the normal distribution with a diagonal covariance matrix. This results in computational efficien…
In this paper we propose a model that combines the strengths of RNNs and SGVB: the Variational Recurrent Auto-Encoder (VRAE). Such a model can be used for efficient, large scale unsupervised learning on time series data, mapping the time series data to a latent vector representation. The model is generative, such that …
Deep learning reconstructs pressure fields and classifies leakage rates in CCS storage sites.
MIAEAD detects anomalies in mixed data types.
Reparameterization of variational auto-encoders with continuous random variables is an effective method for reducing the variance of their gradient estimates. In the discrete case, one can perform reparametrization using the Gumbel-Max trick, but the resulting objective relies on an operation and is non-dif…
Fisher auto-encoders use Fisher divergence for more robust generative modeling.
Improved image reconstruction using VAEs with Student's t-prior.
We present two instances, L-GAE and L-VGAE, of the variational graph auto-encoding family (VGAE) based on separating feature propagation operations from graph convolution layers typically found in graph learning methods to a single linear matrix computation made prior to input in standard auto-encoder architectures. Th…
Tutorial on using neural networks for single cell data analysis.
The variational auto-encoder (VAE) is a popular method for learning a generative model and embeddings of the data. Many real datasets are hierarchically structured. However, traditional VAEs map data in a Euclidean latent space which cannot efficiently embed tree-like structures. Hyperbolic spaces with negative curvatu…
Decision making is a process that is extremely prone to different biases. In this paper we consider learning fair representations that aim at removing nuisance (sensitive) information from the decision process. For this purpose, we propose to use deep generative modeling and adapt a hierarchical Variational Auto-Encode…
In this note we present a generative model of natural images consisting of a deep hierarchy of layers of latent random variables, each of which follows a new type of distribution that we call rectified Gaussian. These rectified Gaussian units allow spike-and-slab type sparsity, while retaining the differentiability nec…
XploVAE improves recommendation by balancing known and novel items.
C-VAE improves VAE by resolving prior issues and generating better samples.
Variational inference (VI) and Markov chain Monte Carlo (MCMC) are two main approximate approaches for learning deep generative models by maximizing marginal likelihood. In this paper, we propose using annealed importance sampling for learning deep generative models. Our proposed approach bridges VI with MCMC. It gener…
New model reconstructs flow from sparse data with uncertainty quantification.
Graph auto-encoder predicts unobserved node features from biological networks and omics data.
Electrocardiogram signals are omnipresent in medicine. A vital aspect in the analysis of this data is the identification and classification of heart beat types which is often done through automated algorithms. Advancements in neural networks and deep learning have led to a high classification accuracy. However, the fin…
BF-VAE estimates uncertainty from LF and HF QoI samples.
Paper proposes a novel auto-encoder for latent density estimation.
Variational Auto-Encoders (VAEs) have become very popular techniques to perform inference and learning in latent variable models as they allow us to leverage the rich representational power of neural networks to obtain flexible approximations of the posterior of latent variables as well as tight evidence lower bounds (…
The contractive auto-encoder learns a representation of the input data that captures the local manifold structure around each data point, through the leading singular vectors of the Jacobian of the transformation from input to representation. The corresponding singular values specify how much local variation is plausib…
Auto-encoders are among the most popular neural network architecture for dimension reduction. They are composed of two parts: the encoder which maps the model distribution to a latent manifold and the decoder which maps the latent manifold to a reconstructed distribution. However, auto-encoders are known to provoke cha…
Reconstruction error is a prevalent score used to identify anomalous samples when data are modeled by generative models, such as (variational) auto-encoders or generative adversarial networks. This score relies on the assumption that normal samples are located on a manifold and all anomalous samples are located outside…