MRI method predicts glioma features, survival, and endothelial proliferation.
problem Invasive biopsy limits detection of glioma features due to tumor heterogeneity.
method Voxel-wise, multiparametric MRI radiomics with k-NN classifier.
result Model accurately predicts disease compositions, survival, and endothelial proliferation.
SegAN-CAT improves brain tumor segmentation in MRI using adversarial networks.
problem Improving brain tumor segmentation accuracy in MRI.
method Adversarial Networks, transfer learning, single modality MRI.
result Transfer learning improves single modality MRI segmentation performance.
Intensity augmentation improves breast MRI segmentation accuracy.
problem Improving segmentation accuracy across different MRI scanners and protocols.
method Applied intensity augmentation in addition to geometric augmentation during training.
result Increased segmentation performance from 0.71 to 0.90.
Machine learning for ASD diagnosis using morphological MRI networks.
problem Challenging to diagnose ASD using MRI due to heterogeneity and incomplete network neuroscience.
method Crowdsourced Kaggle competition to develop and benchmark ML pipelines.
result First-ranked team achieved 70% accuracy, 72.5% sensitivity, and 67.5% specificity.
StackNet predicts fluid intelligence from brain images of adolescents.
problem Predicting fluid intelligence in adolescents using brain imaging.
method Feature extraction, normalization, denoising, selection, StackNet architecture, 11 models, 3 layers, 10-fold cross-validation.
result StackNet achieves mean squared errors of 82.42 on training/validation and 94.25 on testing.
Deep learning aids in automatic detection and segmentation of brain metastases.
problem Manual detection and segmentation of brain metastases is tedious and time-consuming.
method Deep learning approach using a fully convolutional neural network (CNN).
result Deep learning approach achieves high precision, recall, and Dice scores.
SFCNeXt estimates brain age from small MRI datasets.
problem Efficiently estimating brain age from limited MRI data.
method Simple fully convolutional network (SFCNeXt) with SPEC and HRL.
result SFCNeXt outperforms complex models in small sample size scenarios.
Acquisition of Magnetic Resonance Imaging (MRI) scans can be accelerated by under-sampling in k-space (i.e., the Fourier domain). In this paper, we consider the problem of optimizing the sub-sampling pattern in a data-driven fashion. Since the reconstruction model's performance depends on the sub-sampling pattern, we c…
Bayesian PixelCNN improves semi-supervised learning in MRI data.
problem Lack of robust uncertainty measures in deep generative models for MRI data.
method Extended PixelCNN to volumetric MRI data and reformulated as a deep Gaussian process.
result Improved semi-supervised learning performance in MRI data.
Background: Parkinson's disease (PD) is a prevalent long-term neurodegenerative disease. Though the diagnostic criteria of PD are relatively well defined, the current medical imaging diagnostic procedures are expertise-demanding, and thus call for a higher-integrated AI-based diagnostic algorithm. Methods: In this pape…
Study compares CNNs for Alzheimer's disease classification, addressing reproducibility issues.
problem Difficulty comparing AD classification performance across studies due to variations in components.
method Systematic literature review, open-source framework, rigorous comparison of CNN architectures.
result Different 3D CNN approaches performed similarly, but not better than SVM with voxel-based features.
Develops a semi-supervised learning method to generate missing neuroimaging modalities.
problem Lack of paired neuroimaging data for training and inference.
method Semi-Supervised Adversarial CycleGAN (SSA-CGAN) using adversarial and cycle losses.
result Improves reconstruction error and robustness to noise.
Machine learning analysis of neuroimaging data can accurately predict chronological age in healthy people and deviations from healthy brain ageing have been associated with cognitive impairment and disease. Here we sought to further establish the credentials of "brain-predicted age" as a biomarker of individual differe…
Dual U-net models improve multi-channel MRI image reconstruction.
problem Improving MRI image reconstruction from multi-channel data.
method Two-element U-nets (W-nets) in k-space and image domains, evaluated for four configurations.
result Dual domain methods are more advantageous for simultaneous reconstruction of all channels.
Algorithms for Magnetic Resonance (MR) image reconstruction from undersampled measurements exploit prior information to compensate for missing k-space data. Deep learning (DL) provides a powerful framework for extracting such information from existing image datasets, through learning, and then using it for reconstructi…
Neural network predicts intelligence from brain structure measurements.
problem Predicting intelligence scores from brain structure measurements.
method Four-layer fully-connected neural network (FNN) using volumes, WM/GM contrast, and cortical thickness.
result Achieved MSE of 94.0270 in test set.
XPDNet wins MRI reconstruction challenge with neural network.
problem MRI reconstruction from under-sampled data.
method Inspired by MRI and computer vision best practices, XPDNet uses a neural network.
result XPDNet achieved state-of-the-art results in the 2020 fastMRI challenge.
Generative adversarial networks reconstruct MRI images without full data.
problem Lack of fully-sampled ground truth data for supervised MRI reconstruction.
method Generative adversarial networks for unsupervised MRI reconstruction.
result Reconstructed images show more anatomical structure than conventional methods.
3D CNN accurately classifies infant neurodevelopmental age from MRI scans.
problem Estimating neurodevelopmental age in infants from MRI data.
method 3D Convolutional Neural Network (3D CNN) trained on MRI images of 112 infants.
result 3D CNN achieves 99% sensitivity and 98.3% specificity in age classification.
Radiomics approach improves cardiac CVD diagnosis from cine-MRI.
problem Inaccurate expert visualization or clinical indices for CVD classification.
method Estimating radiomic features from cine-MRI, feature selection, advanced machine learning.
result Radiomics features correctly classified 100 cases of five cardiac classes.
New MRI method maps tissue parameters more accurately by ignoring voxel independence.
problem Voxel independence assumption limits model fitting reliability and repeatability.
method Self-supervised deep variational approach with Gaussian mixture prior.
result Our method outperforms current techniques in dMRI simulations and real data.
StaPLR improves Alzheimer's disease classification by identifying important MRI scan types and measures.
problem Classifying Alzheimer's disease using multi-source MRI data.
method Stacked penalized logistic regression (StaPLR) with hierarchical multi-view structure and new view importance measure.
result StaPLR identifies the most important MRI scan types and measures for Alzheimer's disease classification.
LOUPE optimizes MRI under-sampling patterns for faster scans.
problem Accelerating MRI scans while maintaining image quality.
method End-to-end learning framework that trains on full-resolution scans.
result LOUPE-optimized masks yield superior reconstructions with 8x faster scans.
Deep learning speeds up MRI image reconstruction from sparse data.
problem Efficiently reconstructing MRI images from limited data.
method Data-driven, model-driven, and integrated deep learning approaches.
result Potential for deep learning to significantly speed up MRI reconstruction.
Enhances MRI image quality with Conditional WGAN and adaptive balancing.
problem Struggles to reconstruct sharp images with fine detail.
method Conditional Wasserstein Generative Adversarial Network (WGAN) with Adaptive Gradient Balancing.
result Produces sharper images than other techniques.
Transform learning improves MRI image reconstruction from sparse data.
problem Efficiently reconstruct MRI images from limited data.
method TL-based methods using learned models and transform domains.
result TL-based methods outperform classical CS methods in MRI reconstruction.
Deep learning improves MRI image quality from down-sampled data.
problem Improving MRI image quality from accelerated, down-sampled k-space data.
method Deep Residual Dense U-Net architecture with Residual Dense Block and new loss function.
result The proposed method achieves better performance in reconstructing high-quality images from down-sampled k-space data.
3D CNNs interpret brain MRI differences between men and women.
problem Interpreting 3D CNNs for voxel-wise brain MRI analysis.
method Three interpretation methods: Meaningful Perturbations, Grad CAM, and Guided Backpropagation.
result Voxel-wise 3D CNN interpretation of brain MRI data.
Study identifies key MRI features for predicting cognitive performance after mTBI.
problem Identify relevant diffusion MRI metrics for cognitive functions in mTBI patients.
method Proposes a novel feature selection method combining best-first search with genetic algorithm crossover.
result Achieves significantly more accurate predictions than other feature selection algorithms.
A fast deep learning method for parallel MRI without calibration.
problem Calibration issues in parallel MRI reconstruction.
method Model-based deep learning, self-learning non-linear annihilation filters, Fourier domain pre-learning.
result Significantly faster than SLR methods (3 orders of magnitude), improved performance with spatial domain prior.
Diffusion MRI is the modality of choice to study alterations of white matter. In past years, various works have used diffusion MRI for automatic classification of AD. However, classification performance obtained with different approaches is difficult to compare and these studies are also difficult to reproduce. In the …
CSGM framework applied to clinical MRI data for robust reconstructions.
problem Applying deep generative priors to clinical MRI data for high-quality reconstructions.
method Training a generative prior on brain scans from the fastMRI dataset and using Langevin dynamics for posterior sampling.
result Posterior sampling via Langevin dynamics achieves high quality reconstructions in clinical MRI data.
New neural network improves MRI reconstruction for non-Cartesian data.
problem Improving MRI reconstruction for non-Cartesian data acquisitions.
method Density-compensated unrolled neural networks.
result Density-compensated unrolled neural networks outperform baselines.
This study improves lung tumor segmentation in mice MRI scans with nnU-Net, reducing annotation needs.
problem Accurate lung tumor segmentation in mice MRI scans for drug discovery.
method Optimized nnU-Net 3D model for lung tumor segmentation with minimal annotations.
result nnU-Net 3D models outperform 2D models in MRI mice scans, requiring fewer annotations.
Accelerating Magnetic Resonance Imaging (MRI) by taking fewer measurements has the potential to reduce medical costs, minimize stress to patients and make MRI possible in applications where it is currently prohibitively slow or expensive. We introduce the fastMRI dataset, a large-scale collection of both raw MR measure…
New method MRI improves machine learning models' ability to generalize to unseen data.
problem Machine learning models often fail to generalize well to out-of-distribution data.
method Introduces a new notion of invariance (MRI) and a practical version (MRI-v1) to improve model generalization.
result MRI-v1 guarantees invariant predictors and outperforms IRM-v1 in various settings.
New method optimizes MRI sampling patterns for faster scans.
problem Accelerate MRI scans without sacrificing image quality.
method Joint learning of adaptive sampling patterns and model-based recovery.
result Improved MR image quality compared to other methods.
MRI identifies chronic symptoms in mTBI patients.
problem Chronic symptoms in mTBI patients are hard to characterize.
method Multi-parametric MRI and low-dimensional projection.
result MRI metrics correlate with patient symptoms.
New method removes MRI banding without post-processing.
problem MRI banding in reconstructed images.
method Adversarial training to penalize banding structures.
result Superior banding removal compared to baseline.
Deep learning improves MRI analysis of MSK disorders.
problem Accurate and rapid analysis of musculoskeletal disorders from MRI scans.
method Convolutional neural networks (CNN) for automatic classification of knee abnormalities.
result Multi-view deep learning showed promising performance in classifying MSK abnormalities.
A central question for active learning (AL) is: "what is the optimal selection?" Defining optimality by classifier loss produces a new characterisation of optimal AL behaviour, by treating expected loss reduction as a statistical target for estimation. This target forms the basis of model retraining improvement (MRI), …
New method corrects MRI biases across scanners and sites.
problem Site and scanner biases in diffusion MRI data.
method Learning invariant representations using variational auto-encoders (VAE).
result Improvements on test data relative to a baseline method.
Paper extends 2D ZSAD to 3D MRI without training, achieving robust anomaly detection.
problem Challenges in extending zero-shot anomaly detection to 3D medical images.
method Constructs localized volumetric tokens by aggregating 2D slices processed by 2D foundation models.
result Training-free, batch-based ZSAD effectively extends from 2D encoders to full 3D MRI volumes.
IFR-Net improves MRI images with faster, better detail recovery.
problem Fine structure loss in high-speed MRI scans.
method Iterative feature refinement network with trainable parameters and CNN-based inversion blocks.
result Preserves image details and structural information with faster reconstruction.
Novel method adapts MRI brain images across multiple domains.
problem Generalization failure in medical image learning across different acquisition parameters.
method Consistency loss combined with adversarial learning.
result Significantly outperforms other domain adaptation methods in MRI lesion segmentation.
Obtaining magnetic resonance images (MRI) with high resolution and generating quantitative image-based biomarkers for assessing tissue biochemistry is crucial in clinical and research applications. How- ever, acquiring quantitative biomarkers requires high signal-to-noise ratio (SNR), which is at odds with high-resolut…
A method for MRI brain tumor segmentation using feature vectors and kernel dictionary learning.
problem Segmenting brain tumor regions in MRI images.
method Extracting feature vectors, training kernel dictionaries, and selecting informative feature vectors.
result The method outperforms other methods in segmentation accuracy and reduces training time.
A deep learning framework segments deep cerebellar nuclei from 7T MRI, improving accuracy and consistency.
problem Challenging to accurately segment small deep cerebellar nuclei using standard MRI protocols.
method Proposes DCN-Net, a deep learning framework that encodes contextual information and handles imbalanced data.
result Improves segmentation accuracy and consistency compared to existing methods.