arXiv research

Several machine learning problems arising in natural language processing can be modeled as a sequence labeling problem. We provide Gaussian process models based on pseudo-likelihood approximation to perform sequence labeling. Gaussian processes (GPs) provide a Bayesian approach to learning in a kernel based framework. …

Unified model for sequence labeling and classification.

Locally-contextual CRFs improve sequence labeling performance.

Conditional Random Fields (CRF) are frequently applied for labeling and segmenting sequence data. Morency et al. (2007) introduced hidden state variables in a labeled CRF structure in order to model the latent dynamics within class labels, thus improving the labeling performance. Such a model is known as Latent-Dynamic…

We report an extension of a Keras Model, called CTCModel, to perform the Connectionist Temporal Classification (CTC) in a transparent way. Combined with Recurrent Neural Networks, the Connectionist Temporal Classification is the reference method for dealing with unsegmented input sequences, i.e. with data that are a co…

Consider a general machine learning setting where the output is a set of labels or sequences. This output set is unordered and its size varies with the input. Whereas multi-label classification methods seem a natural first resort, they are not readily applicable to set-valued outputs because of the growth rate of the o…

Conditional random fields (CRFs) have been shown to be one of the most successful approaches to sequence labeling. Various linear-chain neural CRFs (NCRFs) are developed to implement the non-linear node potentials in CRFs, but still keeping the linear-chain hidden structure. In this paper, we propose NCRF transducers, …

We combine multi-task learning and semi-supervised learning by inducing a joint embedding space between disparate label spaces and learning transfer functions between label embeddings, enabling us to jointly leverage unlabelled data and auxiliary, annotated datasets. We evaluate our approach on a variety of sequence cl…

Paper proposes semi-supervised learning using change points for sequence classification.

State-of-the-art sequence labeling systems traditionally require large amounts of task-specific knowledge in the form of hand-crafted features and data pre-processing. In this paper, we introduce a novel neutral network architecture that benefits from both word- and character-level representations automatically, by usi…

k-Nearest Neighbors is one of the most fundamental but effective classification models. In this paper, we propose two families of models built on a sequence to sequence model and a memory network model to mimic the k-Nearest Neighbors model, which generate a sequence of labels, a sequence of out-of-sample feature vecto…

In several natural language tasks, labeled sequences are available in separate domains (say, languages), but the goal is to label sequences with mixed domain (such as code-switched text). Or, we may have available models for labeling whole passages (say, with sentiments), which we would like to exploit toward better po…

Multi-label classification (MLC) assigns multiple labels to each sample. Prior studies show that MLC can be transformed to a sequence prediction problem with a recurrent neural network (RNN) decoder to model the label dependency. However, training a RNN decoder requires a predefined order of labels, which is not direct…

We consider higher-order linear-chain conditional random fields (HO-LC-CRFs) for sequence modelling, and use sum-product networks (SPNs) for representing higher-order input- and output-dependent factors. SPNs are a recently introduced class of deep models for which exact and efficient inference can be performed. By com…

In this paper, we explore the ways to improve POS-tagging using various types of auxiliary losses and different word representations. As a baseline, we utilized a BiLSTM tagger, which is able to achieve state-of-the-art results on the sequence labelling tasks. We developed a new method for character-level word represen…

The paper introduces uncertainty quantification for NER models.

Classifier chain (CC) is a multi-label learning approach that constructs a sequence of binary classifiers according to a label order. Each classifier in the sequence is responsible for predicting the relevance of one label. When training the classifier for a label, proceeding labels will be taken as extended features. …

Unlike images or videos data which can be easily labeled by human being, sensor data annotation is a time-consuming process. However, traditional methods of human activity recognition require a large amount of such strictly labeled data for training classifiers. In this paper, we present an attention-based convolutiona…

Extracts main content from web pages using neural sequence labeling.

Automatic sleep staging has been often treated as a simple classification problem that aims at determining the label of individual target polysomnography (PSG) epochs one at a time. In this work, we tackle the task as a sequence-to-sequence classification problem that receives a sequence of multiple epochs as input and…

Forest Fire Clustering discovers cell types from single-cell data.

Neural approaches to sequence labeling often use a Conditional Random Field (CRF) to model their output dependencies, while Recurrent Neural Networks (RNN) are used for the same purpose in other tasks. We set out to establish RNNs as an attractive alternative to CRFs for sequence labeling. To do so, we address one of t…

Develops STC for sequential data with missing labels.

A new algorithm detects changepoints in labeled and unlabeled data.

One of the fundamental tasks in understanding genomics is the problem of predicting Transcription Factor Binding Sites (TFBSs). With more than hundreds of Transcription Factors (TFs) as labels, genomic-sequence based TFBS prediction is a challenging multi-label classification task. There are two major biological mechan…

Future predictions on sequence data (e.g., videos or audios) require the algorithms to capture non-Markovian and compositional properties of high-level semantics. Context-free grammars are natural choices to capture such properties, but traditional grammar parsers (e.g., Earley parser) only take symbolic sentences as i…

Deep Convolutional Neural Networks (DCNN) has shown excellent performance in a variety of machine learning tasks. This manuscript presents Deep Convolutional Neural Fields (DeepCNF), a combination of DCNN with Conditional Random Field (CRF), for sequence labeling with highly imbalanced label distribution. The widely-us…

The paper extends influence functions to sequence tagging tasks for better model interpretability.

Personal assistant AI systems such as Siri, Cortana, and Alexa have become widely used as a means to accomplish tasks through natural language commands. However, components in these systems generally rely on supervised machine learning algorithms that require large amounts of hand-annotated training data, which is expe…

Artificial neural networks (ANNs) have gained a well-deserved popularity among machine learning tools upon their recent successful applications in image- and sound processing and classification problems. ANNs have also been applied for predicting the family or function of a protein, knowing its residue sequence. Here w…

Paper presents a method to train NER models without labelled data using weak supervision.

New method detects TC imagery patterns for rapid intensity change.

Complex textual information extraction tasks are often posed as sequence labeling or \emph{shallow parsing}, where fields are extracted using local labels made consistent through probabilistic inference in a graphical model with constrained transitions. Recently, it has become common to locally parametrize these models…

Contradiction graphs reveal VC dimension threshold.

Recently, there has been growing interest in multi-speaker speech recognition, where the utterances of multiple speakers are recognized from their mixture. Promising techniques have been proposed for this task, but earlier works have required additional training data such as isolated source signals or senone alignments…

New PL method improves ASR accuracy without pseudo-labels.

Gene annotation has traditionally required direct comparison of DNA sequences between an unknown gene and a database of known ones using string comparison methods. However, these methods do not provide useful information when a gene does not have a close match in the database. In addition, each comparison can be costly…

Since manually labeling training data is slow and expensive, recent industrial and scientific research efforts have turned to weaker or noisier forms of supervision sources. However, existing weak supervision approaches fail to model multi-resolution sources for sequential data, like video, that can assign labels to in…

Sequence-to-Sequence (seq2seq) modeling has rapidly become an important general-purpose NLP tool that has proven effective for many text-generation and sequence-labeling tasks. Seq2seq builds on deep neural language modeling and inherits its remarkable accuracy in estimating local, next-word distributions. In this work…

Inertial information processing plays a pivotal role in ego-motion awareness for mobile agents, as inertial measurements are entirely egocentric and not environment dependent. However, they are affected greatly by changes in sensor placement/orientation or motion dynamics, and it is infeasible to collect labelled data …

This study improves knowledge distillation for RNN-T models with noisy labels.

We consider the problem of training input-output recurrent neural networks (RNN) for sequence labeling tasks. We propose a novel spectral approach for learning the network parameters. It is based on decomposition of the cross-moment tensor between the output and a non-linear transformation of the input, based on score …

Long Short-Term Memory (LSTM) is a recurrent neural network (RNN) architecture that has been designed to address the vanishing and exploding gradient problems of conventional RNNs. Unlike feedforward neural networks, RNNs have cyclic connections making them powerful for modeling sequences. They have been successfully u…

Recent studies have shown that neural models can achieve high performance on several sequence labelling/tagging problems without the explicit use of linguistic features such as part-of-speech (POS) tags. These models are trained only using the character-level and the word embedding vectors as inputs. Others have shown …

In this paper, we consider a new low-quality label learning problem: learning time series detection models from temporally imprecise labels. In this problem, the data consist of a set of input time series, and supervision is provided by a sequence of noisy time stamps corresponding to the occurrence of positive class e…

Tail-GNNs improve protein function prediction using relational reinforcement.

Conformer encoder reverses sequence in time dimension, affecting decoder training.

Multidimensional recurrent neural networks (MDRNNs) have shown a remarkable performance in the area of speech and handwriting recognition. The performance of an MDRNN is improved by further increasing its depth, and the difficulty of learning the deeper network is overcome by using Hessian-free (HF) optimization. Given…