A locally-built, LLM-digested index of recent arXiv papers in quant finance, geometry/topology, and statistical ML — keyword search served straight from SQLite on this machine.
The paper introduces Precision Disease Networks (PDN) for predicting medical outcomes.
Rare diseases affect a relatively small number of people, which limits investment in research for treatments and cures. Developing an efficient method for rare disease detection is a crucial first step towards subsequent clinical research. In this paper, we present a semi-supervised learning framework for rare disease …
Study fairness in vaccine allocation in social networks.
Rare diseases affecting 350 million individuals are commonly associated with delay in diagnosis or misdiagnosis. To improve those patients' outcome, rare disease detection is an important task for identifying patients with rare conditions based on longitudinal medical claims. In this paper, we present a deep learning m…
For precision medicine and personalized treatment, we need to identify predictive markers of disease. We focus on Alzheimer's disease (AD), where magnetic resonance imaging scans provide information about the disease status. By combining imaging with genome sequencing, we aim at identifying rare genetic markers associa…
rags2ridges simplifies graphical modeling of high-dimensional data.
In this paper, we present our approach for the 2018 Medico Task classifying diseases in the gastrointestinal tract. We have proposed a system based on global features and deep neural networks. The best approach combines two neural networks, and the reproducible experimental results signify the efficiency of the propose…
AdaptiveNet tackles disease progression prediction in rheumatoid arthritis using deep neural networks.
Novel approach combines local and global brain changes for AD prediction.
New method uses probabilistic independence to discover disease signatures from medical records.
Chronic Pulmonary Aspergillosis (CPA) is a complex lung disease caused by infection with Aspergillus. Computed tomography (CT) images are frequently requested in patients with suspected and established disease, but the radiological signs on CT are difficult to quantify making accurate follow-up challenging. We propose …
The paper predicts diseases using both clinical and genomics data.
Today, despite decades of developments in medicine and the growing interest in precision healthcare, vast majority of diagnoses happen once patients begin to show noticeable signs of illness. Early indication and detection of diseases, however, can provide patients and carers with the chance of early intervention, bett…
Hierarchical CNNs improve diagnosis of GI diseases from histopathological images.
Deep Belief Network predicts lncRNA-disease associations with high accuracy.
As societies around the world are ageing, the number of Alzheimer's disease (AD) patients is rapidly increasing. To date, no low-cost, non-invasive biomarkers have been established to advance the objectivization of AD diagnosis and progression assessment. Here, we utilize Bayesian neural networks to develop a multivari…
Disease-gene prediction (DGP) refers to the computational challenge of predicting associations between genes and diseases. Effective solutions to the DGP problem have the potential to accelerate the therapeutic development pipeline at early stages via efficient prioritization of candidate genes for various diseases. In…
A method to explain disease transformation using biomarker covariance matrices.
Study improves machine learning models for GI tract disease detection using comprehensive evaluations and cross-dataset testing.
Omics-GAN uses GANs to generate synthetic multi-omics data for improved disease prediction.
In retrospective assessments, internet news reports have been shown to capture early reports of unknown infectious disease transmission prior to official laboratory confirmation. In general, media interest and reporting peaks and wanes during the course of an outbreak. In this study, we quantify the extent to which med…
Massively multi-label prediction/classification problems arise in environments like health-care or biology where very precise predictions are useful. One challenge with massively multi-label problems is that there is often a long-tailed frequency distribution for the labels, which results in few positive examples for t…
HMRNN combines HMMs and neural networks for Alzheimer's disease forecasting.
Predicting highrisk vascular diseases is a significant issue in the medical domain. Most predicting methods predict the prognosis of patients from pathological and radiological measurements, which are expensive and require much time to be analyzed. Here we propose deep attention models that predict the onset of the hig…
CNNs accurately measure airways and vessels on CT images, improving lung disease diagnosis.
Graphical models have gained a lot of attention recently as a tool for learning and representing dependencies among variables in multivariate data. Often, domain scientists are looking specifically for differences among the dependency networks of different conditions or populations (e.g. differences between regulatory …
Heart disease is one of the most common diseases causing morbidity and mortality. Electrocardiogram (ECG) has been widely used for diagnosing heart diseases for its simplicity and non-invasive property. Automatic ECG analyzing technologies are expected to reduce human working load and increase diagnostic efficacy. Howe…
Graph network predicts circRNA-disease associations using multi-source similarity features.
Framework integrates mental disorder measurements for personalized treatment.
Imaging fluorescent disease biomarkers in tissues and skin is a non-invasive method to screen for health conditions. We report an automated process that combines intraoral fluorescent porphyrin biomarker imaging, clinical examinations and machine learning for correlation of systemic health conditions with periodontal d…
This study improves AKI prediction precision using CNN on EHR data.
ENN method uses expectile regression for genetic data analysis of complex diseases.
MOTGNN integrates multi-omics data for disease classification with improved accuracy and interpretability.
DDP models dynamic comorbidity networks from event data.
RL algorithms with medical integration improve personalized treatment recommendations.
Bayesian approach models neurodegenerative diseases without clinical labels.
Novel method identifies proteomic risk markers for Alzheimer disease.
Graph Attention Networks predict disease state from single-cell data.
Drug repositioning is an attractive cost-efficient strategy for the development of treatments for human diseases. Here, we propose an interpretable model that learns disease self-representations for drug repositioning. Our self-representation model represents each disease as a linear combination of a few other diseases…
One primary task of population health analysis is the identification of risk factors that, for some subpopulation, have a significant association with some health condition. Examples include finding lifestyle factors associated with chronic diseases and finding genetic mutations associated with diseases in precision he…
We develop three efficient approaches for generating visual explanations from 3D convolutional neural networks (3D-CNNs) for Alzheimer's disease classification. One approach conducts sensitivity analysis on hierarchical 3D image segmentation, and the other two visualize network activations on a spatial map. Visual chec…
Generative model designs drug combinations for improved efficacy and reduced side effects.
VEGN uses graph neural networks to predict disease-causing mutations from genetic variants.
Paper classifies Parkinson's disease from speech in three languages using CNNs and transfer learning.
In this work, we present our various contributions to the objective of building a decision support tool for the diagnosis of rare diseases. Our goal is to achieve a state of knowledge where the uncertainty about the patient's disease is below a predetermined threshold. We aim to reach such states while minimizing the a…
New method predicts AD progression using MEG brain networks.
AI-assisted heart disease diagnosis reduces misdiagnosis and saves lives.
Pattern recognition methods using neuroimaging data for the diagnosis of Alzheimer's disease have been the subject of extensive research in recent years. In this paper, we use deep learning methods, and in particular sparse autoencoders and 3D convolutional neural networks, to build an algorithm that can predict the di…