On-device research index

arXiv research

A locally-built, LLM-digested index of recent arXiv papers in quant finance, geometry/topology, and statistical ML — keyword search served straight from SQLite on this machine.

168,742 papers · 148 categories

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8 results for “Microbiology”

Artificial Intelligence for Microbiology and Microbiome Researchq-bio.QM

AI enhances microbiology and microbiome research through machine learning.

problem Understanding microbial life and its impact on health and the environment.

method AI-driven approaches including machine learning and deep learning.

result Transformative role in enhancing microbial life understanding.

Artificial Intelligence Microbiology Microbiome Machine Learning Deep Learning

2024-11-02abs ↗pdf ↗

Predicting Antimicrobial Resistance in the Intensive Care Unitstat.AP

Study predicts antimicrobial resistance in ICU patients quickly.

problem Delayed AMR testing in ICU leads to suboptimal treatment.

method Developed predictive models using clinical and microbiological data.

result Machine learning models predict AMR with higher accuracy than naive model.

antimicrobial resistance ICU clinical prediction machine learning antibiotic treatment

2021-11-05abs ↗pdf ↗

An Automated Deep Learning Approach for Bacterial Image Classificationq-bio.QM

Deep learning automates bacterial image classification.

problem Manual bacterial classification is time-consuming and error-prone.

method ResNet-50 pre-trained CNN architecture with transfer learning.

result Average classification accuracy of 99.2%.

deep learning bacterial classification image recognition transfer learning CNN

2019-12-04abs ↗pdf ↗

Kernel Self-Attention in Deep Multiple Instance Learningcs.LG

A new method for deep multiple instance learning using self-attention.

problem Classifying bags of instances with dependencies.

method Introducing Self-Attention-based aggregation operation for bags of instances.

result SA-AbMILP outperforms other models in various datasets.

Self-Attention Multiple Instance Learning Deep Learning Kernel Methods Medical Image Analysis

2020-05-25abs ↗pdf ↗

Inferring Microbial Biomass Yield and Cell Weight using Probabilistic Macrochemical Modelingq-bio.QM

Method improves microbial biomass yield estimation from noisy data.

problem Estimating microbial biomass yields from noisy cell counts and substrate measurements.

method Probabilistic macrochemical modeling to relax cell weight assumptions and improve robustness.

result Model provides accurate uncertainty estimates of key parameters.

microbial growth biomass yield cell weight probabilistic modeling uncertainty estimation

2020-10-06abs ↗pdf ↗

Tree-based variational inference for Poisson log-normal modelsstat.ME

Tree-based variational inference improves PLN model for hierarchical count data.

problem Limited applicability of PLN model in ecosystems due to lack of hierarchical tree structures.

method Introduced PLN-Tree model integrating structured variational inference techniques.

result Enhanced generative improvements and practical interpretability in microbiome modeling.

variational inference Poisson log-normal hierarchical count data structured information taxonomy

2024-06-25abs ↗pdf ↗

A unified spectra analysis workflow for the assessment of microbial contamination of ready to eat green salads: Comparative study and application of non-invasive sensorscs.LG

The present study provides a comparative assessment of non-invasive sensors as means of estimating the microbial contamination and time-on-shelf (i.e. storage time) of leafy green vegetables, using a novel unified spectra analysis workflow. Two fresh ready-to-eat green salads were used in the context of this study for …

2019-03-21abs ↗pdf ↗

Benchmark of structured machine learning methods for microbial identification from mass-spectrometry datastat.ML

Microbial identification is a central issue in microbiology, in particular in the fields of infectious diseases diagnosis and industrial quality control. The concept of species is tightly linked to the concept of biological and clinical classification where the proximity between species is generally measured in terms o…

2015-06-24abs ↗pdf ↗