GLSearch uses GNN to learn efficient search strategies for finding large common subgraphs.
problem Finding the Maximum Common Subgraph (MCS) between two graphs is NP-hard and hard to solve efficiently.
method GLSearch combines GNN and DQN to learn optimal node pairs for expansion in a branch and bound algorithm.
result GLSearch finds significantly larger common subgraphs than heuristic search methods given the same computation budget.
Branch-and-bound (BnB) algorithms are widely used to solve combinatorial problems, and the performance crucially depends on its branching heuristic.In this work, we consider a typical problem of maximum common subgraph (MCS), and propose a branching heuristic inspired from reinforcement learning with a goal of reaching…
We propose graph kernels based on subgraph matchings, i.e. structure-preserving bijections between subgraphs. While recently proposed kernels based on common subgraphs (Wale et al., 2008; Shervashidze et al., 2009) in general can not be applied to attributed graphs, our approach allows to rate mappings of subgraphs by …
A new algorithm reduces graph complexity for better dense subgraph analysis.
problem Mining dense subgraphs in large graphs for better analysis.
method Multi-stage graph peeling algorithm (M-PA) with two-stage data screening.
result M-PA produces similar dense subgraphs to the previous PA but with reduced graph complexity.
We consider the densest k-subgraph problem, which seeks to identify the k-node subgraph of a given input graph with maximum number of edges. This problem is well-known to be NP-hard, by reduction to the maximum clique problem. We propose a new convex relaxation for the densest k-subgraph problem, based on a nucle…
Applied researchers often construct a network from a random sample of nodes in order to infer properties of the parent network. Two of the most widely used sampling schemes are subgraph sampling, where we sample each vertex independently with probability p and observe the subgraph induced by the sampled vertices, and…
It is well-known that the Pachner graph of n-vertex triangulated 2-spheres is connected, i.e., each pair of n-vertex triangulated 2-spheres can be turned into each other by a sequence of edge flips for each n≥4. In this article, we study various induced subgraphs of this graph. In particular, we prove tha…
Ripple Walk Training tackles graph neural network training issues for large and deep graphs.
problem Neighbors explosion, node dependence, and oversmoothing in large and deep GNNs.
method Subgraph-based training framework with Ripple Walk Sampler for high-quality subgraph sampling.
result RWT improves training efficiency and reduces space complexity for deep and large GNNs.
Estimates social network structure from random walk subgraphs.
problem Recovering population structure from random walk subgraphs in stochastic block models.
method Maximum likelihood estimation, SAEM algorithm, de-biasing techniques.
result New de-biased estimator provides more accurate recovery of network structure.
Link prediction is a key problem for network-structured data. Link prediction heuristics use some score functions, such as common neighbors and Katz index, to measure the likelihood of links. They have obtained wide practical uses due to their simplicity, interpretability, and for some of them, scalability. However, ev…
This paper finds efficient algorithms for approximating Markov networks with k-tree topologies.
problem Efficiently approximating Markov networks with complex topologies.
method Developed O(n^{k+1})-time algorithms for finding maximum spanning k-trees (MSkT) that retain certain subgraphs.
result Optimal approximation of Markov networks with k-tree topology is achieved in polynomial time.
Enhances GNNs to better capture local graph structures.
problem Limited expressiveness of GNNs due to star-shaped message passing.
method Extends local aggregation to subgraph patterns using GNN encoders.
result Significantly improved performance on graph ML tasks.
SubGNN tackles subgraph prediction challenges in graphs.
problem Subgraphs in graphs are challenging to predict due to their internal topology and external connectivity.
method SubGNN introduces a novel subgraph routing mechanism to learn disentangled subgraph representations.
result SubGNN achieves considerable performance gains on subgraph classification tasks, outperforming strong baseline methods.
Developing new ideas and algorithms in the fields of graph processing and relational learning requires public datasets. While Wikidata is the largest open source knowledge graph, involving more than fifty million entities, it is larger than needed in many cases and even too large to be processed easily. Still, it is a …
A biclustering algorithm finds dense disjoint subgraphs in weighted bipartite graphs.
problem Finding dense disjoint bicliques in a weighted bipartite graph.
method Semidefinite programming-based branch-and-cut algorithm with upper and lower bounds.
result The algorithm can solve much larger instances than general-purpose solvers.
The paper introduces subgraph nomination for finding similar subgraphs in networks.
problem Finding similar subgraphs in networks using example subgraphs.
method Formalizes subgraph nomination framework with user-supervised retrieval.
result User-supervised retrieval improves performance in subgraph nomination.
NeuroMatch efficiently matches subgraphs in large graphs using neural networks.
problem Determining the presence and location of a query graph in a large target graph.
method NeuroMatch decomposes graphs into subgraphs, embeds them using graph neural networks, and matches them directly in the embedding space.
result NeuroMatch is 100x faster and 18% more accurate than existing methods.
A wide variety of application domains are concerned with data consisting of entities and their relationships or connections, formally represented as graphs. Within these diverse application areas, a common problem of interest is the detection of a subset of entities whose connectivity is anomalous with respect to the r…
Unified framework for subgraph-enhanced GNNs, improving prediction accuracy and reducing computation time.
problem Limited understanding of subgraph-enhanced GNNs and their relation to the Weisfeiler-Leman hierarchy.
method Theoretical framework, theoretical expressivity results, and data-driven subgraph sampling methods.
result Data-driven subgraph-enhanced GNNs outperform non-data-driven methods in predictive performance.
Study area-minimizing subgraphs in integer lattices.
problem Finding the most efficient subgraphs in integer lattices.
method Formulated functions of bounded variations, classified subgraphs in 2D, proved properties in higher dimensions.
result Classified area-minimizing subgraphs in 2D integer lattice up to isomorphisms.
Graph Shift (GS) algorithms are recently focused as a promising approach for discovering dense subgraphs in noisy data. However, there are no theoretical foundations for proving the convergence of the GS Algorithm. In this paper, we propose a generic theoretical framework consisting of three key GS components: simplex …
GNNS uses graph neural networks to efficiently estimate subgraph frequency distributions.
problem Efficiently calculating subgraph frequency distributions in large networks.
method Graph Neural Networks (GNNS) for sampling and estimating subgraph frequencies.
result GNNS achieves comparable accuracy with a significant speedup of three orders of magnitude.
Proposes GIB for recognizing informative subgraphs in graphs.
problem Recognizing a subgraph that is maximally informative yet compressive.
method Graph Information Bottleneck (GIB) framework, mutual information estimator, bi-level optimization, connectivity loss.
result IB-subgraph improves graph classification, interpretation, and denoising.
New method identifies common cause in causal insufficiency, revealing complex phase transitions.
problem Identifying common cause in causal insufficiency with observed joint probability.
method Generalized maximum likelihood method, closely related to maximum entropy principle.
result Identifies consistent common cause that aligns with the common cause principle.
RevTrack identifies suspicious subgraphs on blockchain for AML.
problem Detecting money laundering in cryptocurrency transactions.
method Graph-based machine learning, tracking initial senders and final receivers.
result RevClassify outperforms state-of-the-art subgraph classification techniques in cost and accuracy.
Faster algorithm for generalized mean densest subgraph problem.
problem Finding subgraphs with highest average p-th-power degree. method GENPEEL++ algorithm, which yields (2(p+1))1/p-approximation for p∈[1,+∞) with time complexity O(m(logn)). result GENPEEL++ algorithm provides faster and more efficient solution for generalized mean densest subgraph problem.
Let Γ be a finite graph and let Γe be its extension graph. We inductively define a sequence {Γi} of finite induced subgraphs of Γe through successive applications of an operation called "doubling along a star". Then we show that every finite induced subgraph of Γe is iso…
Paper tackles NP-complete subgraph isomorphism counting problem.
problem Counting subgraph isomorphisms in large graphs.
method Learning framework that augments representation learning architectures and iteratively attends pattern and target graphs.
result Scalable learning approach counts subgraph isomorphisms in linear time.
Classification and regression in which the inputs are graphs of arbitrary size and shape have been paid attention in various fields such as computational chemistry and bioinformatics. Subgraph indicators are often used as the most fundamental features, but the number of possible subgraph patterns are intractably large …
The so called "globalization" process (i.e. the inexorable integration of markets, currencies, nation-states, technologies and the intensification of consciousness of the world as a whole) has a behavior exactly equivalent to a system that is tending to a maximum entropy state. This globalization process obeys a collec…
Mining discriminative subgraph patterns from graph data has attracted great interest in recent years. It has a wide variety of applications in disease diagnosis, neuroimaging, etc. Most research on subgraph mining focuses on the graph representation alone. However, in many real-world applications, the side information …
Estimates eigenvalues of poly-Laplace operator on lattice subgraphs.
problem Estimating eigenvalues of poly-Laplace operator on subgraphs of lattice graphs.
method Introduced discrete poly-Laplace operator, derived upper and lower bounds for eigenvalues.
result Poly-Laplace eigenvalues are at least squares of lower-order poly-Laplace eigenvalues.
Efficiently matches subgraphs in noisy data without node labels.
problem Subgraph isomorphism in noisy, real-valued graphs.
method Two-step approach: extract topology, then expand matches.
result Realistically sub-linear computational efficiency, robustness to noise.
ESAN improves graph neural networks by processing subgraphs.
problem Limitations of MPNNs in graph isomorphism.
method ESAN represents graphs as sets of subgraphs and processes them with equivariant architectures.
result ESAN increases the expressive power of GNNs and more expressive architectures.
Mining discriminative features for graph data has attracted much attention in recent years due to its important role in constructing graph classifiers, generating graph indices, etc. Most measurement of interestingness of discriminative subgraph features are defined on certain graphs, where the structure of graph objec…
Paper studies competitive networks where teams aim to minimize their own objectives, adapting to each other's strategies.
problem Competitive networks where teams have conflicting objectives.
method Proposes diffusion learning algorithms for two classes of network games: zero-sum and non-zero-sum.
result Stability performance of proposed algorithms analyzed and demonstrated through experiments.
We present a supervised-learning algorithm from graph data (a set of graphs) for arbitrary twice-differentiable loss functions and sparse linear models over all possible subgraph features. To date, it has been shown that under all possible subgraph features, several types of sparse learning, such as Adaboost, LPBoost, …
Upper bounds for Steklov eigenvalues in subgraphs of polynomial growth Cayley graphs.
problem Finding upper bounds for Steklov eigenvalues in subgraphs of polynomial growth Cayley graphs.
method Discretizing a bounded domain and using comparison theorems.
result The $k^{\mbox{th}}$ eigenvalue tends to 0 proportionally to 1/∣B∣d−11. GMT improves interpretability of XGNNs by approximating SubMT.
problem Limited understanding of existing interpretable subgraph learning methods.
method Formulated subgraph multilinear extension (SubMT) and designed GMT architecture.
result GMT outperforms state-of-the-art in both interpretability and generalizability.
Introduces a new manifold from a graph subgraph.
problem None explicitly stated in the abstract.
method Defined geometrically from a combinatorial subgraph of the Hoffman-Singleton graph.
result Geometric properties of the new manifold presented.
SELO model predicts link signs better than SDGNN using subgraph encoding and linear optimization.
problem Inferring the sign of links in signed networks with limited sign data.
method Subgraph Encoding via Linear Optimization (SELO) approach to learn edge embeddings.
result SELO model outperforms state-of-the-art methods on multiple real-world signed networks.
Neural network for subgraph similarity computation with pruning.
problem Computing subgraph similarity between a target and query graph.
method Convert pruning to node relabeling, relax to differentiable problem, design neural network for SED computation.
result Establishes new state-of-the-art results across multiple benchmark datasets.
PSimGNN partitions graphs into subgraphs for efficient graph similarity computation.
problem Efficiently compute graph similarity scores for large graphs.
method Graph partitioning followed by subgraph-level and node-level comparisons using a graph neural network.
result PSimGNN outperforms state-of-the-art methods in graph similarity computation tasks.
In this paper, we consider the problem of estimating multiple graphical models simultaneously using the fused lasso penalty, which encourages adjacent graphs to share similar structures. A motivating example is the analysis of brain networks of Alzheimer's disease using neuroimaging data. Specifically, we may wish to e…
Metric graphs have subgraphs with entropy at least λ.
problem Finding subgraphs with high entropy in metric graphs.
method Proving existence of subgraphs with entropy at least λ for graphs of rank r with entropy 1.
result Metric graphs have subgraphs with entropy at least λ.
The study extends Tutte's conflict graph concept to nonplanar graphs.
problem Understanding the structure of nonplanar graphs through conflict graphs.
method Defining a signed conflict graph for maximally planar subgraphs and analyzing their balance.
result For graphs with a flat embedding, every maximal planar subgraph has unbalanced conflict graphs if and only if the graph is intrinsically linked.
Finite subgraphs in flip graphs ensure unique surface embeddings.
problem Ensuring unique embeddings of surfaces based on flip graphs.
method Analyzing finite subgraphs within flip graphs of surfaces.
result Injective homomorphisms are uniquely extendable and induced by embeddings.
We prove that there is an algorithm to determine if a given finite graph is an induced subgraph of a given curve graph.