Study re-evaluates MIMIC-III codes, finding many are under-coded.
arXiv research
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Purveyors of malicious network attacks continue to increase the complexity and the sophistication of their techniques, and their ability to evade detection continues to improve as well. Hence, intrusion detection systems must also evolve to meet these increasingly challenging threats. Machine learning is often used to …
Study develops an interpretable model for early mortality prediction in elderly MODS patients.
Paper proposes sharing models instead of data for smart health predictions.
Scoping review and benchmarking of synthetic EHR data generation methods.
Automated medical prognosis has gained interest as artificial intelligence evolves and the potential for computer-aided medicine becomes evident. Nevertheless, it is challenging to design an effective system that, given a patient's medical history, is able to predict probable future conditions. Previous works, mostly c…
Improves medical note processing by training model on related concepts and global context.
Study evaluates federated learning with differential privacy on MIMIC-III, improving model performance with careful parameter tuning.
Deep learning models (aka Deep Neural Networks) have revolutionized many fields including computer vision, natural language processing, speech recognition, and is being increasingly used in clinical healthcare applications. However, few works exist which have benchmarked the performance of the deep learning models with…
Given independent samples generated from the joint distribution , we study the problem of Conditional Independence (CI-Testing), i.e., whether the joint equals the CI distribution $p^{CI}(\mathbf{x},\mathbf{y},\mathbf{z})= p(\mathbf{z}) p(\mathbf{y}|\mathbf{z})p(\mathbf{x}|\mathbf{z…
Time series data are prevalent in electronic health records, mostly in the form of physiological parameters such as vital signs and lab tests. The patterns of these values may be significant indicators of patients' clinical states and there might be patterns that are unknown to clinicians but are highly predictive of s…
Machine learning for healthcare often trains models on de-identified datasets with randomly-shifted calendar dates, ignoring the fact that data were generated under hospital operation practices that change over time. These changing practices induce definitive changes in observed data which confound evaluations which do…
New method steals deep neural network knowledge using unlabeled data.
Objective: Patient notes in electronic health records (EHRs) may contain critical information for medical investigations. However, the vast majority of medical investigators can only access de-identified notes, in order to protect the confidentiality of patients. In the United States, the Health Insurance Portability a…
Robust machine learning relies on access to data that can be used with standardized frameworks in important tasks and the ability to develop models whose performance can be reasonably reproduced. In machine learning for healthcare, the community faces reproducibility challenges due to a lack of publicly accessible data…
In this paper, a Wide Learning architecture is proposed that attempts to automate the feature engineering portion of the machine learning (ML) pipeline. Feature engineering is widely considered as the most time consuming and expert knowledge demanding portion of any ML task. The proposed feature recommendation approach…
PIN models feature interactions using a neural network that mimics decision trees.
Paper simplifies complex sports analytics models for better understanding.
The paper tackles ICU discharge strategies by evaluating optimal stopping scenarios.
Study benchmarks uncertainty quantification in chest X-ray classification.
X-CAL improves survival model calibration without sacrificing predictive power.
Simulates sepsis treatment decisions using a world model approach.
New model predicts ICU patient stays more accurately.
We study multiple rule-based and machine learning (ML) models for sepsis detection. We report the first neural network detection and prediction results on three categories of sepsis. We have used the retrospective Medical Information Mart for Intensive Care (MIMIC)-III dataset, restricted to intensive care unit (ICU) p…
Trends in terrestrial temperature variability are perhaps more relevant for species viability than trends in mean temperature. In this paper, we develop methodology for estimating such trends using multi-resolution climate data from polar orbiting weather satellites. We derive two novel algorithms for computation that …
We consider technology-assisted mimicry attacks in the context of automatic speaker verification (ASV). We use ASV itself to select targeted speakers to be attacked by human-based mimicry. We recorded 6 naive mimics for whom we select target celebrities from VoxCeleb1 and VoxCeleb2 corpora (7,365 potential targets) usi…
Self-paced learning (SPL) mimics the cognitive process of humans, who generally learn from easy samples to hard ones. One key issue in SPL is the training process required for each instance weight depends on the other samples and thus cannot easily be run in a distributed manner in a large-scale dataset. In this paper,…
New method improves compatibility of risk stratification models without sacrificing accuracy.
GRU-D detects age-specific missing patterns in vital signs.
Generating datasets that "look like" given real ones is an interesting tasks for healthcare applications of ML and many other fields of science and engineering. In this paper we propose a new method of general application to binary datasets based on a method for learning the parameters of a latent variable moment that …
Relational Mimic improves visual imitation learning from video demonstrations.
Deep Reinforcement Learning (DRL) has achieved impressive success in many applications. A key component of many DRL models is a neural network representing a Q function, to estimate the expected cumulative reward following a state-action pair. The Q function neural network contains a lot of implicit knowledge about the…
MedCAT extracts valuable medical information from unstructured text.
While deep learning models become more widespread, their ability to handle unseen data and generalize for any scenario is yet to be challenged. In medical imaging, there is a high heterogeneity of distributions among images based on the equipment that generates them and their parametrization. This heterogeneity trigger…
Framework improves clinical timeline reconstruction from text and tables.
We propose a practical approach based on federated learning to solve out-of-domain issues with continuously running embedded speech-based models such as wake word detectors. We conduct an extensive empirical study of the federated averaging algorithm for the "Hey Snips" wake word based on a crowdsourced dataset that mi…
One key use of k-means clustering is to identify cluster prototypes which can serve as representative points for a dataset. However, a drawback of using k-means cluster centers as representative points is that such points distort the distribution of the underlying data. This can be highly disadvantageous in problems wh…
Deep learning predicts heart failure readmission from clinical notes.
The MIMIC-CXR dataset is (to date) the largest released chest x-ray dataset consisting of 473,064 chest x-rays and 206,574 radiology reports collected from 63,478 patients. We present the results of training and evaluating a collection of deep convolutional neural networks on this dataset to recognize multiple common t…
CLIP dataset helps extract action items from hospital discharge notes.
Mimetic initialization improves Transformer training on small datasets.
dnamite simplifies NAMs for feature selection and survival analysis.
We present a method to develop a Hodge theory for tangential cohomology of foliations by mimicing Witten's approach to ordinary Morse theory by perturbations of the Laplacian
More accurate machine learning models often demand more computation and memory at test time, making them difficult to deploy on CPU- or memory-constrained devices. Teacher-student compression (TSC), also known as distillation, alleviates this burden by training a less expensive student model to mimic the expensive teac…
k-Nearest Neighbors is one of the most fundamental but effective classification models. In this paper, we propose two families of models built on a sequence to sequence model and a memory network model to mimic the k-Nearest Neighbors model, which generate a sequence of labels, a sequence of out-of-sample feature vecto…
Electronic health records (EHR) are rich heterogeneous collection of patient health information, whose broad adoption provides great opportunities for systematic health data mining. However, heterogeneous EHR data types and biased ascertainment impose computational challenges. Here, we present mixEHR, an unsupervised g…
ButterflyFlow uses butterfly matrices for efficient invertible layers in normalizing flows.
Gaussian state space models have been used for decades as generative models of sequential data. They admit an intuitive probabilistic interpretation, have a simple functional form, and enjoy widespread adoption. We introduce a unified algorithm to efficiently learn a broad class of linear and non-linear state space mod…