Variational autoencoders often collapse, showing latent variables are non-identifiable.
problem Posterior collapse in variational autoencoders due to non-identifiable latent variables.
method Proves latent variable non-identifiability causes posterior collapse. Proposes latent-identifiable models using Brenier maps and input convex neural networks.
result Latent-identifiable models resolve posterior collapse and provide meaningful representations.
A new method for separating mixed signals in space and time.
problem Nonlinear and nonstationary spatio-temporal data challenges.
method Identifiable autoregressive variational autoencoder.
result The method outperforms existing techniques in blind source separation and spatio-temporal prediction.
Through training on unlabeled data, anomaly detection has the potential to impact computer-aided diagnosis by outlining suspicious regions. Previous work on deep-learning-based anomaly detection has primarily focused on the reconstruction error. We argue instead, that pixel-wise anomaly ratings derived from a Variation…
Proposes a new VAE model to estimate treatment effects from confounded data.
problem Estimating treatment effects in the presence of confounding variables.
method Intact-VAE, a variant of variational autoencoder (VAE), using a latent variable for confounders.
result Proves identification of treatment effects under unconfoundedness and shows state-of-the-art performance.
Paper uses VAEs to detect radar targets in complex noise.
problem Detecting radar targets in compound clutter and thermal noise.
method Proposes a VAE architecture to distinguish radar targets from various noise types.
result The VAE outperforms classical detectors in challenging noise conditions.
Proves identifiability of deep latent variable models without auxiliary information.
problem Identify deep generative models without side information.
method Analyzes a broad class of deep latent variable models with universal approximation capabilities.
result Identifiability of generative models without side information u. Neural Decomposition breaks down VAE latent structure for better interpretability.
problem Limited interpretability of VAE latent representations.
method Adapted functional ANOVA to VAEs, applying constraints for identifiability.
result Decomposes data variation into latent and fixed input effects.
New framework identifies strongly identifiable models from flexible generators.
problem Indeterminacies in generative models that prevent unique latent codes.
method Theoretical framework for analyzing latent variable models, excluding certain indeterminacies.
result Strong identifiability possible even with flexible nonlinear generators.
A key advance in learning generative models is the use of amortized inference distributions that are jointly trained with the models. We find that existing training objectives for variational autoencoders can lead to inaccurate amortized inference distributions and, in some cases, improving the objective provably degra…
A new VAE model improves disentanglement with identifiable latent factors.
problem Learning disentangled representations without inductive biases.
method A novel VAE with a conditional prior over latent variables.
result Superior performance in disentanglement metrics.
We employ unsupervised machine learning techniques to learn latent parameters which best describe states of the two-dimensional Ising model and the three-dimensional XY model. These methods range from principal component analysis to artificial neural network based variational autoencoders. The states are sampled using …
Variational autoencoders are powerful algorithms for identifying dominant latent structure in a single dataset. In many applications, however, we are interested in modeling latent structure and variation that are enriched in a target dataset compared to some background---e.g. enriched in patients compared to the genera…
Weak supervision enables learning causal representations from unstructured data.
problem Learning high-level causal representations from unstructured data like images.
method Weakly supervised setting with paired samples before and after interventions. Implicit latent causal models using variational autoencoders.
result Models can reliably identify causal structure and disentangle causal variables.
Paper shows identifiability of causal models with unobserved variables.
problem Identify latent variables in causal models with unobserved variables.
method Developed an autoencoding variational Bayes algorithm.
result Identifiability achieved with generalized faithfulness assumptions.
Intact-VAE estimates treatment effects with latent confounders.
problem Estimating treatment effects under unobserved confounding.
method Intact-VAE, a VAE variant, models latent confounders to identify treatment effects.
result Intact-VAE is a consistent estimator of treatment effects under certain settings.
Method learns latent SDEs from high-dimensional time series.
problem Learning latent stochastic differential equations from time series data.
method Self-supervised learning with variational autoencoders and Euler-Maruyama approximation.
result Can recover SDE coefficients and latent variables up to isometry with infinite data.
A new method uses variational autoencoders to speed up greenhouse gas sensitivity calculations.
problem Computational inefficiency in generating LPDM sensitivities from gas mole fraction observations.
method Developed a convolutional variational autoencoder (CVAE) to emulate LPDM sensitivities in a low-dimensional space.
result The CVAE-based emulator outperforms traditional methods and can be applied to various LPDMs.
SAMI learns disentangled representations from data.
problem Learning disentangled representations from data.
method Combines diffusion models and VAEs to learn disentangled representations.
result SAMI learns disentangled representations that are interpretable and useful.
Variational autoencoders provide a principled framework for learning deep latent-variable models and corresponding inference models. In this work, we provide an introduction to variational autoencoders and some important extensions.
BasisVAE combines VAE and clustering for tabular data analysis.
problem Lack of insights in tabular high-dimensional data analysis.
method Combines VAE with probabilistic clustering prior for joint dimensionality reduction and clustering.
result Learned one-hot basis function representation for translation-invariant features.
This paper looks into the problem of detecting network anomalies by analyzing NetFlow records. While many previous works have used statistical models and machine learning techniques in a supervised way, such solutions have the limitations that they require large amount of labeled data for training and are unlikely to d…
We focus on the problem of unsupervised cell outlier detection and repair in mixed-type tabular data. Traditional methods are concerned only with detecting which rows in the dataset are outliers. However, identifying which cells are corrupted in a specific row is an important problem in practice, and the very first ste…
New method handles indirect mediators in CMA for complex scenarios.
problem Handling indirect and multi-dimensional mediators in causal mediation analysis.
method Identifiable Variational Autoencoder (iVAE) architecture for multi-dimensional, indirectly observed mediators.
result Accurate estimation of direct and mediated effects in synthetic and semi-synthetic experiments.
New method identifies latent causal variables from observed data, overcoming indeterminacies.
problem Identifying latent causal variables from observed data, especially when latent variables are weight-variant.
method Introduces a novel identifiability condition for latent causal models, proposing SuaVE method.
result Identifies latent causal variables up to trivial permutation and scaling, demonstrating consistency and efficacy.
Identifiability, or recovery of the true latent representations from which the observed data originates, is de facto a fundamental goal of representation learning. Yet, most deep generative models do not address the question of identifiability, and thus fail to deliver on the promise of the recovery of the true latent …
A standard Variational Autoencoder, with a Euclidean latent space, is structurally incapable of capturing topological properties of certain datasets. To remove topological obstructions, we introduce Diffusion Variational Autoencoders with arbitrary manifolds as a latent space. A Diffusion Variational Autoencoder uses t…
New method prevents posterior collapse in iVAE models.
problem Posterior collapse in iVAE models where observations and ICs are independent given covariates.
method Developed CI-iVAE by considering a mixture of encoder and posterior distributions in the objective function.
result Prevents posterior collapse, resulting in latent representations with more information of the observations.
We extend Stochastic Gradient Variational Bayes to perform posterior inference for the weights of Stick-Breaking processes. This development allows us to define a Stick-Breaking Variational Autoencoder (SB-VAE), a Bayesian nonparametric version of the variational autoencoder that has a latent representation with stocha…
A scalable model for high-dimensional longitudinal data.
problem Modeling high-dimensional, non-linear, time-varying longitudinal data.
method LMM-VAE, combining linear mixed models and amortized variational inference.
result Competitive performance across simulated and real-world datasets.
DAEs can generate images without additional loss terms, inheriting VAE properties.
problem Difficulty in using VAEs for practical generative modelling.
method Empirical exploration of DAEs for image generation without novel methods.
result DAEs can generate images successfully without additional loss terms.
Improved detection of brain tumours in MRIs using latent space dissimilarities.
problem Detecting tumours in brain MRIs using unsupervised learning.
method Slice-wise semi-supervised method based on dissimilarity between latent representations of images and their reconstructions.
result Improved detection results with higher resolution images and better reconstructions.
Learning in the latent variable model is challenging in the presence of the complex data structure or the intractable latent variable. Previous variational autoencoders can be low effective due to the straightforward encoder-decoder structure. In this paper, we propose a variational composite autoencoder to sidestep th…
Combines variational autoencoders with normalizing flows for faster training.
problem Training normalizing flow models like Glow is slow and requires deep architectures.
method Integrates Glow with a variational autoencoder to speed up training.
result The combined model achieves similar image quality and likelihood to Glow but trains faster.
Extracting insight from the enormous quantity of data generated from molecular simulations requires the identification of a small number of collective variables whose corresponding low-dimensional free-energy landscape retains the essential features of the underlying system. Data-driven techniques provide a systematic …
Tiered latent representations and latent spaces for molecular graphs provide a simple but effective way to explicitly represent and utilize groups (e.g., functional groups), which consist of the atom (node) tier, the group tier and the molecule (graph) tier. They can be learned using the tiered graph autoencoder archit…
Paper proposes efficient multivariate spatial Fay-Herriot models using variational autoencoders.
problem Estimating population characteristics in small areas with limited data.
method Integrates multivariate spatial Fay-Herriot model with variational autoencoders to leverage spatial structure efficiently.
result Significant computational efficiency improvements for high-dimensional datasets.
In Bayesian machine learning, the posterior distribution is typically computationally intractable, hence variational inference is often required. In this approach, an evidence lower bound on the log likelihood of data is maximized during training. Variational Autoencoders (VAE) are one important example where variation…
New method combines domain changes and sparse mixing for better latent variable learning.
problem Challenges in identifying latent variables due to insufficient domain changes and violated sparsity constraints.
method Combines sufficient changes and sparse mixing constraints, using domain encoding networks and variational autoencoders.
result Identifiability of latent variables achieved with less restrictive constraints.
Unified framework for generating data by modeling causal and correlational dependencies.
problem Modeling both causal and correlational dependencies among latent factors.
method Causal-Correlation Variational Autoencoder (C2VAE) framework.
result Improves generation quality, disentanglement, and intervention fidelity.
We present two deep generative models based on Variational Autoencoders to improve the accuracy of drug response prediction. Our models, Perturbation Variational Autoencoder and its semi-supervised extension, Drug Response Variational Autoencoder (Dr.VAE), learn latent representation of the underlying gene states befor…
Proposes a physics-informed VAE for disentangling physics from confounding influences.
problem Challenges in inferring and predicting physical systems under partial knowledge.
method Physics-informed variational autoencoder with adversarial training.
result Model successfully disentangles known physics from confounding influences.
AR-Flow VAE improves blind source separation with flexible autoregressive priors.
problem Unsupervised blind source separation of latent signals from mixtures.
method AR-Flow VAE uses autoregressive flows to model latent sources, enhancing flexibility and capturing complex dependencies.
result AR-Flow VAE effectively separates latent sources, demonstrating improved performance over conventional methods.
Model integrates multi-view temporal data for better understanding of latent dynamics.
problem Understanding time-dependent heterogeneous properties from multi-view data.
method Generative model using variational autoencoder and recurrent neural network.
result Identifies disentangled latent embeddings across views while accounting for time factor.
Proposes variational autoencoder for efficient MMSE estimation.
problem Efficient parameterized MMSE estimation for noisy observations.
method Variational autoencoder models data distribution, approximates MMSE.
result Proposed estimator performs well compared to state-of-the-art.
In recent years Variation Autoencoders have become one of the most popular unsupervised learning of complicated distributions.Variational Autoencoder (VAE) provides more efficient reconstructive performance over a traditional autoencoder. Variational auto enocders make better approximaiton than MCMC. The VAE defines a …
A new model for multiview data analysis using graph autoencoders.
problem Nonlinear multiview canonical correlation analysis for large datasets.
method Variational approach with graph convolutional neural networks.
result Competitive performance on classification, clustering, and recommendation tasks.
Variational autoencoders learn unsupervised data representations, but these models frequently converge to minima that fail to preserve meaningful semantic information. For example, variational autoencoders with autoregressive decoders often collapse into autodecoders, where they learn to ignore the encoder input. In th…
The paper explores how invertibility affects the complexity of encoder models in VAEs.
problem The complexity of the encoder model in VAEs when the generative map is invertible.
method Formalizes the concept of strong invertibility and analyzes the complexity of the encoder model.
result Strongly invertible generative maps allow for simpler encoder models, while non-invertible maps require exponentially larger encoders.