HIRM models noisy, sparse, heterogeneous relational data using hierarchical clustering and Dirichlet processes.
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Infinite hierarchical contrastive clustering identifies personal environments linked to health outcomes.
Many data are naturally modeled by an unobserved hierarchical structure. In this paper we propose a flexible nonparametric prior over unknown data hierarchies. The approach uses nested stick-breaking processes to allow for trees of unbounded width and depth, where data can live at any node and are infinitely exchangeab…
A hierarchical gamma process infinite edge partition model is proposed to factorize the binary adjacency matrix of an unweighted undirected relational network under a Bernoulli-Poisson link. The model describes both homophily and stochastic equivalence, and is scalable to big sparse networks by focusing its computation…
We propose the segmented iHMM (siHMM), a hierarchical infinite hidden Markov model (iHMM) that supports a simple, efficient inference scheme. The siHMM is well suited to segmentation problems, where the goal is to identify points at which a time series transitions from one relatively stable regime to a new regime. Conv…
In this note we provide detailed derivations of two versions of small-variance asymptotics for hierarchical Dirichlet process (HDP) mixture models and the HDP hidden Markov model (HDP-HMM, a.k.a. the infinite HMM). We include derivations for the probabilities of certain CRP and CRF partitions, which are of more general…
Hierarchical NMF organizes COVID-19 literature into a searchable tree.
We present a nonparametric prior over reversible Markov chains. We use completely random measures, specifically gamma processes, to construct a countably infinite graph with weighted edges. By enforcing symmetry to make the edges undirected we define a prior over random walks on graphs that results in a reversible Mark…
We propose a nonparametric Bayesian factor regression model that accounts for uncertainty in the number of factors, and the relationship between factors. To accomplish this, we propose a sparse variant of the Indian Buffet Process and couple this with a hierarchical model over factors, based on Kingman's coalescent. We…
Deep learning models based on CNNs are predominantly used in image classification tasks. Such approaches, assuming independence of object categories, normally use a CNN as a feature learner and apply a flat classifier on top of it. Object classes in many settings have hierarchical relations, and classifiers exploiting …
We present the Infinite Latent Events Model, a nonparametric hierarchical Bayesian distribution over infinite dimensional Dynamic Bayesian Networks with binary state representations and noisy-OR-like transitions. The distribution can be used to learn structure in discrete timeseries data by simultaneously inferring a s…
In many hierarchical inverse problems, not only do we want to estimate high- or infinite-dimensional model parameters in the parameter-to-observable maps, but we also have to estimate hyperparameters that represent critical assumptions in the statistical and mathematical modeling processes. As a joint effect of high-di…
The cooperative hierarchical structure is a common and significant data structure observed in, or adopted by, many research areas, such as: text mining (author-paper-word) and multi-label classification (label-instance-feature). Renowned Bayesian approaches for cooperative hierarchical structure modeling are mostly bas…
Advances combinatorial complexes for better modeling of hierarchical and set-type relations.
Uniform undistortion in cyclic subgroups of certain groups.
Hyperbolic embeddings have recently gained attention in machine learning due to their ability to represent hierarchical data more accurately and succinctly than their Euclidean analogues. However, multi-relational knowledge graphs often exhibit multiple simultaneous hierarchies, which current hyperbolic models do not c…
Study on infinitely-wide CNNs and their adaptability to function spatial scales.
Different from the traditional classification tasks which assume mutual exclusion of labels, hierarchical multi-label classification (HMLC) aims to assign multiple labels to every instance with the labels organized under hierarchical relations. Besides the labels, since linguistic ontologies are intrinsic hierarchies, …
This work improves KG embeddings by integrating hyperbolic and attention mechanisms.
In this paper, we present an infinite hierarchical non-parametric Bayesian model to extract the hidden factors over observed data, where the number of hidden factors for each layer is unknown and can be potentially infinite. Moreover, the number of layers can also be infinite. We construct the model structure that allo…
Study evaluates initialization strategies for infinite hidden Markov models.
Generates infinite-depth hierarchical clusters from few examples.
Recent work in learning ontologies (hierarchical and partially-ordered structures) has leveraged the intrinsic geometry of spaces of learned representations to make predictions that automatically obey complex structural constraints. We explore two extensions of one such model, the order-embedding model for hierarchical…
Latent variable models for network data extract a summary of the relational structure underlying an observed network. The simplest possible models subdivide nodes of the network into clusters; the probability of a link between any two nodes then depends only on their cluster assignment. Currently available models can b…
We propose a restricted collapsed draw (RCD) sampler, a general Markov chain Monte Carlo sampler of simultaneous draws from a hierarchical Chinese restaurant process (HCRP) with restriction. Models that require simultaneous draws from a hierarchical Dirichlet process with restriction, such as infinite Hidden markov mod…
Analyzing and understanding the structure of complex relational data is important in many applications including analysis of the connectivity in the human brain. Such networks can have prominent patterns on different scales, calling for a hierarchically structured model. We propose two non-parametric Bayesian hierarchi…
Hierarchical clustering uses OWA operators to generalize linkage methods and avoid dendrogram inversions.
Neural networks benefit from intermediate representations, reducing sample complexity.
Develops scalable model for learning velocity fields in complex traffic scenarios.
Agglomerative hierarchical clustering can be implemented with several strategies that differ in the way elements of a collection are grouped together to build a hierarchy of clusters. Here we introduce versatile linkage, a new infinite system of agglomerative hierarchical clustering strategies based on generalized mean…
Diffusion models generalize better with hierarchical data structure and regularization.
We propose an exact slice sampler for Hierarchical Dirichlet process (HDP) and its associated mixture models (Teh et al., 2006). Although there are existing MCMC algorithms for sampling from the HDP, a slice sampler has been missing from the literature. Slice sampling is well-known for its desirable properties includin…
Proposes a new Bayesian score for learning network structure from related datasets.
Researchers identify latent variables and causal structures from nonlinear hierarchical models.
Proposes a method to improve hierarchical clustering using set-level structural priors.
Bayesian models forecast COVID-19 hospitalizations at single sites.
We learn multiple hypotheses for related tasks under a latent hierarchical relationship between tasks. We exploit the intuition that for domain adaptation, we wish to share classifier structure, but for multitask learning, we wish to share covariance structure. Our hierarchical model is seen to subsume several previous…
In this paper, we establish upper bounds on the length of the shortest conjugator between pairs of infinite order elements in a wide class of groups. We obtain a general result which applies to all hierarchically hyperbolic groups, a class which includes mapping class groups, right-angled Artin groups, Burger--Mozes-ty…
The recently developed variational autoencoders (VAEs) have proved to be an effective confluence of the rich representational power of neural networks with Bayesian methods. However, most work on VAEs use a rather simple prior over the latent variables such as standard normal distribution, thereby restricting its appli…
Bayesian Hierarchical Invariant Prediction refines ICP for better scalability and prior integration.
Bayesian algorithm improves word representations using semantic taxonomy.
Proposes a hierarchical curriculum loss to improve model accuracy and interpretability.
Hierarchical models are versatile tools for joint modeling of data sets arising from different, but related, sources. Fully Bayesian inference may, however, become computationally prohibitive if the source-specific data models are complex, or if the number of sources is very large. To facilitate computation, we propose…
A new drug embedding method using hierarchical drug relations and chemical structures.
Paper uses HGNN to predict stock types from relationships and temporal data.
BoRA finetunes multi-task LLMs by sharing information through hierarchical priors.
New algorithm tracks changes in infinite action space rewards.
Most existing approaches to clustering gene expression time course data treat the different time points as independent dimensions and are invariant to permutations, such as reversal, of the experimental time course. Approaches utilizing HMMs have been shown to be helpful in this regard, but are hampered by having to ch…