In this paper we discuss four problems regarding Markov equivalences for subclasses of loopless mixed graphs. We classify these four problems as finding conditions for internal Markov equivalence, which is Markov equivalence within a subclass, for external Markov equivalence, which is Markov equivalence between subclas…
Complex equivalence classes found in graph homotopy.
problem Complexity of proper homotopy equivalence in graphs.
method Demonstrated Borel completeness and comeager equivalence classes.
result Complex equivalence classes exist in infinite graphs.
Geometric duality connects graph isomorphism and knot equivalence.
problem Understanding the equivalence of graph isomorphism and knot equivalence.
method Observation of geometric duality in planar graphs and links.
result The equivalence relation defined by isomorphisms of checkerboard graphs is the same as 2-isomorphisms of checkerboard graphs.
New equivalence relation on ribbon graphs connects to virtual links.
problem Understanding virtual links through ribbon graphs.
method Introducing a new equivalence relation on ribbon graphs.
result Correspondence between virtual links and ribbon graphs.
Virtual knots with same writhe polynomial have equivalent intersection graphs.
problem Equivalence of intersection graphs for virtual knots.
method Proved equivalence through writhe polynomial.
result Intersection graphs of virtual knots with the same writhe polynomial are equivalent.
The paper shows that relaxing assumptions about causal graphs can lead to exponentially large equivalence classes.
problem The size of Markov equivalence classes under relaxed assumptions.
method Analytical proofs for three settings: sparse random directed acyclic graphs, uniformly random acyclic directed mixed graphs, and uniformly random directed cyclic graphs.
result Exponentially large lower bounds for the expected size of Markov equivalence classes.
Spatial graphs study tangle replacement with equivalence classes.
problem Differentiating spatial graphs and their properties.
method Tangle replacement on spatial graphs, focusing on handcuff graphs.
result One-to-one correspondence between neighborhood equivalence classes and tangles.
System uses neural networks to prove program equivalence via rewrite rules.
problem Proving equivalence between two dataflow graphs.
method Developed a graph-to-sequence neural network trained on example generation to find semantics-preserving rewrite rules.
result System correctly outputs a rewrite sequence for 96% of program pairs, proving equivalence.
Study graph products of groups, classifying them up to measure equivalence and rigidity.
problem Classifying graph products of groups up to measure equivalence and rigidity.
method Measure-theoretic and structural properties of von Neumann algebras, rigidity theorems.
result Quantified measure equivalence classification and rigidity theorems for graph products.
Groups of homotopy equivalences of graphs help realize compact subgroups.
problem Realizing compact subgroups of homotopy equivalences of graphs.
method Introduced a Polish group topology on the group of proper homotopy equivalences and proved the Nielsen Realization theorem.
result Compact subgroups of homotopy equivalences can be realized by simplicial isomorphisms of graphs.
New graph types help identify complex relationships.
problem Understanding complex relationships in data.
method Introducing separable and essentially separable graphs to characterize and identify graphical models.
result Developed algorithms to identify equivalence classes of essentially separable graphs.
The sizes of Markov equivalence classes of directed acyclic graphs play important roles in measuring the uncertainty and complexity in causal learning. A Markov equivalence class can be represented by an essential graph and its undirected subgraphs determine the size of the class. In this paper, we develop a method to …
Characterizes Bayesian networks up to unconditional equivalence.
problem Characterizing Bayesian networks up to unconditional equivalence.
method Transformational characterization via undirected graphs and specified moves.
result Two DAGs are in the same UEC if and only if one can be transformed into the other via a finite sequence of moves.
We study some equivalent properties of the curvature-dimension conditions CD(n,K) inequality on infinite, but locally finite graph. These equivalences are gradient estimate, Poincaré type inequalities and reverse Poincaré inequalities. And we also obtain one equivalent property of gradient estimate for a new notion o…
The paper defines when surfaces are homotopy equivalent to graphs and explores their mapping class groups.
problem Understanding when surfaces are homotopy equivalent to graphs.
method Analyzes second-countable orientable surfaces with noncompact boundary.
result Defines a necessary and sufficient condition for surfaces to be homotopy equivalent to graphs.
We show that the Gromov boundary of the free factor graph for the free group Fn with n>2 generators is the space of equivalence classes of minimal very small indecomposable projective Fn-trees without point stabilizer containing a free factor equipped with a quotient topology. Here two such trees are equivalent if the …
Embeddings of mapping tori for end-periodic graph maps are proven.
problem Embedding mapping tori of end-periodic graph maps into finite complexes.
method Flowline-preserving homotopy equivalence and π1-injective map. result Every mapping class of Γ arising from an end-periodic homotopy equivalence contains a representative whose mapping torus realizes such an embedding.
Proves Khovanov homology has no torsion for bipartite circle graphs.
problem Proving properties of Khovanov homology for bipartite circle graphs.
method Proved homotopy equivalence of independence complexes to wedges of spheres.
result Extreme Khovanov homology has no torsion.
Every infinitely edge-connected graph has a minor of Farey graph or Tℵ0∗t.
problem Characterizing edge-connected graphs with specific minor properties.
method Analyzing the minor structure of infinitely edge-connected graphs.
result Infinitely edge-connected graphs contain Farey graph or Tℵ0∗t as a minor. We present a new family of models that is based on graphs that may have undirected, directed and bidirected edges. We name these new models marginal AMP (MAMP) chain graphs because each of them is Markov equivalent to some AMP chain graph under marginalization of some of its nodes. However, MAMP chain graphs do not onl…
Defines concordance for spatial graphs and proves sliceness equivalence.
problem Understanding concordance and sliceness for spatial graphs.
method Smooth definitions and linking number conditions.
result Sliceness of a spatial graph is equivalent to a condition on linking numbers and a link.
We define an equivalence relation on graphs with signed edges, such that the associated adjacency matrices of two equivalent graphs are congruent over Z. We show that signed graphs whose eigenvalues are larger than −2 are equivalent to one of the simply laced Dynkin diagrams: An, Dn, E6, $E_…
The paper defines and proves the existence of train track maps on graphs of groups.
problem Understanding homotopy equivalences in graphs of groups.
method Developed the theory of train track maps on graphs of groups, defining maps and homotopy equivalences.
result Any homotopy equivalence of a graph of groups may be represented by a relative train track map under certain conditions.
Right-angled Artin groups are classified based on measure equivalence.
problem Classifying right-angled Artin groups using measure equivalence.
method Proved measure equivalence implies isomorphic extension graphs, and used quasi-isometry results.
result No right-angled Artin group is superrigid for measure equivalence.
Study restricts causal graphs with expert knowledge.
problem Restricting causal graphs to include expert orientation knowledge.
method Prove properties, present new orientation rules, develop algorithms.
result Shows how to uniquely represent restricted essential ancestral graphs.
Symmetric TSP is structurally equivalent to a constrained Group Steiner Tree Problem.
problem Finding the shortest tour in a symmetric TSP.
method Structural equivalence between symmetric TSP and constrained Group Steiner Tree Problem.
result Maximizing net weight in the cGSTP is equivalent to minimizing the TSP tour length.
A neighborhood homotopy is an equivalence relation on spatial graphs which is generated by crossing changes on the same component and neighborhood equivalence. We give a complete classification of all 2-component spatial graphs up to neighborhood homotopy by the elementary divisor of a linking matrix with respect to th…
We study real nonsingular projective cubic fourfolds up to deformation equivalence combined with projective equivalence and prove that they are classified by the conjugacy classes of involutions induced by the complex conjugation in the middle homology. Moreover, we provide a graph whose vertices represent the equivale…
A knot diagram has an associated looped interlacement graph, obtained from the intersection graph of the Gauss diagram by attaching loops to the vertices that correspond to negative crossings. This construction suggests an extension of the Kauffman bracket to an invariant of looped graphs, and an extension of Reidemeis…
We prove that the criterion for Markov equivalence provided by Zhao et al. (2005) may involve a set of features of a graph that is exponential in the number of vertices.
A new algorithm for robust causal discovery in small sample sizes.
problem Limited data leads to weak conditional independence tests in causal discovery.
method Proposes a k-PC algorithm that bounds conditioning set size for robust causal discovery. result The k-PC algorithm enables more robust causal discovery in small sample sizes. We prove that for some knot-like objects one can easily recognize non-equivalence w.r.t. all Reidemeister moves by studying some equivalence classes modulo only 2nd Reidemeister moves. There are applications to virtual knots, graph-links and looped graphs.
We define Ak-moves for embeddings of a finite graph into the 3-sphere for each natural number k. Let Ak-equivalence denote an equivalence relation generated by Ak-moves and ambient isotopy. Ak-equivalence implies Ak−1-equivalence. Let F be an Ak−1-equivalence class of the embeddings of …
New method shows pseudo-Anosov flows on graph manifolds can be simplified.
problem Understanding pseudo-Anosov flows on graph manifolds.
method Constructing a partial Birkhoff section with genus one components that misses finitely many closed orbits.
result Every pseudo-Anosov flow on a graph manifold is almost equivalent to a totally periodic flow or a suspension Anosov flow.
We show that the number of entire maximal graphs with finitely many singular points that are conformally equivalent is a universal constant that depends only on the number of singularities, namely 2^$ for graphs with n+1 singularities. We also give an explicit description of the family of entire maximal graphs with a f…
A planar graph is inscribable if it is combinatorial equivalent to the skeleton of a polyhedra which is inscribed in a sphere. For an inscribable graph, in its combinatorial equivalent class, if we could always find polyhedra inscribed in any given convex surface which is sufficiently close to the sphere, then we call …
This supplementary material includes three parts: some preliminary results, four examples, an experiment, three new algorithms, and all proofs of the results in the paper "Reversible MCMC on Markov equivalence classes of sparse directed acyclic graphs".
Polynomial algorithm found for alternating link equivalence.
problem Link equivalence of alternating links in 3-space.
method Tait flyping conjectures, observations from graph theory, and topological graph theory.
result Alternating link equivalence has a polynomial algorithm.
Different directed acyclic graphs (DAGs) may be Markov equivalent in the sense that they entail the same conditional independence relations among the observed variables. Meek (1995) characterizes Markov equivalence classes for DAGs (with no latent variables) by presenting a set of orientation rules that can correctly i…
This paper explains spectral clustering and its equivalence to PCA, breaking it into fully connected and multi-connected cases.
problem Understanding the mathematics behind spectral clustering and its equivalence to PCA.
method Dividing spectral clustering into two categories based on graph connectivity and proving the equivalence to PCA.
result Spectral clustering and PCA are equivalent, with specific proofs for fully connected and multi-connected graphs.
The paper defines conditions for learning causal graphs from data with unobserved variables.
problem Learning causal graphs from data with unobserved variables.
method Formalizes constraint-based structure learning algorithms under conditions and assumptions.
result Natural family of algorithms output Markov equivalent graphs to the causal graph under faithfulness assumption.
Graphs indistinguishable by GNNs are fully characterized.
problem Limited expressiveness of GNNs in distinguishing non-isomorphic graphs.
method Theory of covering spaces to characterize GNN equivalence classes.
result Arbitrarily many non-isomorphic graphs that GNNs cannot distinguish.
New assumptions help identify causal relationships in data.
problem Challenges in identifying causal relationships from observational data.
method Introduced typed directed acyclic graphs to constrain causal relationships.
result The proposed assumptions lead to significant gains in causal graph identification.
Constructs graph manifolds with many Anosov flows.
problem Finding graph manifolds supporting multiple Anosov flows.
method Cutting geodesic flows, pulling back to finite covers, and gluing compatible pairs of flows.
result Constructs graph manifolds with at least n Anosov flows for any n.
Study proves hyperfiniteness of mapping class group actions on surface graphs.
problem Hyperfiniteness of mapping class group actions on surface graphs.
method Infinite unicorn paths and Gromov boundaries of arc and curve graphs.
result Proves hyperfiniteness of orbit equivalence relations induced by mapping class group actions.
As previously known, all 3-manifolds of genus two can be represented by edge-coloured graphs uniquely defined by 6-tuples of integers satisfying simple conditions. The present paper describes an ``elementary transformation'' on these 6-tuples which changes the associated graph but does not change the represented manifo…
New method estimates causal effects without knowing graph structure.
problem Estimating causal effects when graph structure is unknown.
method Testable conditional independence statements for front-door adjustment.
result Effect estimation without Markov equivalence class knowledge.
The paper extends foam theory to more complex trivalent graphs.
problem Extending foam theory to more complex trivalent graphs.
method Considering foams with singular vertices homeomorphic to cones over more general planar trivalent graphs.
result Modules associated with the dodecahedron graph are free of rank 60.