A new multi-task learning estimator improves Gaussian graphical regression model fitting.
problem High error rate in fitting Gaussian graphical regression models due to separate node-wise lasso regressions.
method Proposes a multi-task learning estimator with cross-task group sparsity and within-task element-wise sparsity penalties, solved via an efficient augmented Lagrangian algorithm.
result Error rate improvement over separate node-wise lasso estimates, demonstrated through simulations and application to gene co-expression network study.
We show that the two-stage adaptive Lasso procedure (Zou, 2006) is consistent for high-dimensional model selection in linear and Gaussian graphical models. Our conditions for consistency cover more general situations than those accomplished in previous work: we prove that restricted eigenvalue conditions (Bickel et al.…
Gaussian Graphical Models (GGMs) are popular tools for studying network structures. However, many modern applications such as gene network discovery and social interactions analysis often involve high-dimensional noisy data with outliers or heavier tails than the Gaussian distribution. In this paper, we propose the Tri…
We introduce the truncated Gaussian graphical model (TGGM) as a novel framework for designing statistical models for nonlinear learning. A TGGM is a Gaussian graphical model (GGM) with a subset of variables truncated to be nonnegative. The truncated variables are assumed latent and integrated out to induce a marginal m…
Graphical models with bi-directed edges (<->) represent marginal independence: the absence of an edge between two vertices indicates that the corresponding variables are marginally independent. In this paper, we consider maximum likelihood estimation in the case of continuous variables with a Gaussian joint distributio…
Undirected graphs are often used to describe high dimensional distributions. Under sparsity conditions, the graph can be estimated using ℓ1-penalization methods. We propose and study the following method. We combine a multiple regression approach with ideas of thresholding and refitting: first we infer a sparse u…
LARGE adapts regularization for better graph estimation in high-dimensional data.
problem Challenges in selecting optimal regularization parameters for graph estimation.
method Locally Adaptive Regularization for Graph Estimation (LARGE) that adapts nodewise penalties.
result LARGE consistently outperforms benchmark methods in graph recovery and estimation accuracy.
We consider a graphical model where a multivariate normal vector is associated with each node of the underlying graph and estimate the graphical structure. We minimize a loss function obtained by regressing the vector at each node on those at the remaining ones under a group penalty. We show that the proposed estimator…
We consider the problem of learning high-dimensional Gaussian graphical models. The graphical lasso is one of the most popular methods for estimating Gaussian graphical models. However, it does not achieve the oracle rate of convergence. In this paper, we propose the graphical nonconvex optimization for optimal estimat…
Two algorithms learn Gaussian graphical models from Glauber dynamics trajectories, achieving optimal performance.
problem Learning Gaussian graphical models from a single trajectory of a dependent stochastic process.
method Two algorithms based on dueling-neighborhood search and local statistics built from the update sequence of Glauber dynamics.
result Achieve κ−2 dependence of the information-theoretic lower bounds, mixing-free and signal-optimal. This paper addresses the problem of neighborhood selection for Gaussian graphical models. We present two heuristic algorithms: a forward-backward greedy algorithm for general Gaussian graphical models based on mutual information test, and a threshold-based algorithm for walk summable Gaussian graphical models. Both alg…
A new framework uses matrix flows to unify frequentist and Bayesian approaches for sparse GGMs.
problem Challenges in studying conditional independence among many variables with few observations.
method General framework for variational inference with matrix-variate Normalizing Flow in Gaussian Graphical Models.
result Unified benefits of frequentist and Bayesian frameworks for sparse GGMs.
Proposes a convex method to estimate GGMs with covariates.
problem Improving conditional independence structure estimation with covariates.
method Convex optimization framework for joint estimation of mean and precision matrix.
result Improved theoretical guarantees and practical utility demonstrated.
Develops a new multivariate regression model for complex outcomes.
problem Flexible, heterogeneous, and residual-dependent multivariate regression problems.
method MultiVCBART framework with Graphical Horseshoe priors.
result Empirically outperforms existing models on sparse, high-dimensional datasets.
Proposes a method to estimate functional graphical models from multivariate random functions.
problem Estimating conditional independence structure of multivariate random functions.
method Neighborhood selection approach combining function-on-function regression and graph recovery.
result Statistical consistency of the method in high-dimensional settings.
Graphical lasso may fail to fit models when data points are insufficient.
problem When does graphical lasso fail to select and fit a graphical model?
method Computational experiments with graphical lasso.
result Graphical lasso may fail when the number of data points is less than the maximum likelihood threshold.
Paper introduces a nonparametric functional graphical model for random functions.
problem Estimating probabilistic conditional independence in functional graphical models.
method Functional sufficient dimension reduction to relax Gaussian or copula Gaussian assumptions.
result Enhances estimation accuracy and retains probabilistic conditional independence.
New framework models complex spatial data with basis functions and graphical vectors.
problem Modeling highly-multivariate spatial processes with varying resolutions.
method Extends graphical lasso to multivariate Gaussian processes with independent graphical vectors at different resolutions, using an orthogonal basis and fusion penalty.
result Linear complexity and parsimonious conditional independence structure in multilevel graphical model.
A new method for sparse regression models using graph structure.
problem Sparse regression models for high-dimensional data.
method Decomposes coefficient vector into latent variables, performs regularization on latent variables, uses proximal projection.
result Stable performance compared to other models, especially for high-dimensional data.
In this paper, we propose a new estimation procedure for discovering the structure of Gaussian Markov random fields (MRFs) with false discovery rate (FDR) control, making use of the sorted l1-norm (SL1) regularization. A Gaussian MRF is an acyclic graph representing a multivariate Gaussian distribution, where nodes are…
Neighborhood regression has been a successful approach in graphical and structural equation modeling, with applications to learning undirected and directed graphical models. We extend these ideas by defining and studying an algebraic structure called the neighborhood lattice based on a generalized notion of neighborhoo…
This paper addresses the problem of scalable optimization for L1-regularized conditional Gaussian graphical models. Conditional Gaussian graphical models generalize the well-known Gaussian graphical models to conditional distributions to model the output network influenced by conditioning input variables. While highly …
We address the task of identifying densely connected subsets of multivariate Gaussian random variables within a graphical model framework. We propose two novel estimators based on the Ordered Weighted ℓ1 (OWL) norm: 1) The Graphical OWL (GOWL) is a penalized likelihood method that applies the OWL norm to the lowe…
Method solves Gaussian graphical models on ladder graphs efficiently.
problem Solving Gaussian graphical models on ladder graphs efficiently.
method Proposes a method that depends on the position of zeros in local covariance matrices.
result Efficiently solves Gaussian graphical models on ladder graphs under certain conditions.
Gaussian graphical model is a graphical representation of the dependence structure for a Gaussian random vector. It is recognized as a powerful tool in different applied fields such as bioinformatics, error-control codes, speech language, information retrieval and others. Gaussian graphical model selection is a statist…
Gaussian Graphical Models (GGMs) have wide-ranging applications in machine learning and the natural and social sciences. In most of the settings in which they are applied, the number of observed samples is much smaller than the dimension and they are assumed to be sparse. While there are a variety of algorithms (e.g. G…
New algorithm for learning causal structures with disjoint cycles in linear non-Gaussian models.
problem Learning causal structures with cycles in linear non-Gaussian models.
method Characterizing when graphs determine the same model, using quadratic and cubic polynomial relations, and a strategy of decorrelating cycles and multivariate regression.
result Consistent and computationally efficient algorithm for learning causal structures with disjoint cycles.
While graphical models for continuous data (Gaussian graphical models) and discrete data (Ising models) have been extensively studied, there is little work on graphical models linking both continuous and discrete variables (mixed data), which are common in many scientific applications. We propose a novel graphical mode…
Develops a nonparametric graphical model for conditional independence.
problem Evaluation of conditional independence without distributional assumptions.
method Nonlinear sufficient dimension reduction techniques applied to a nonparametric graphical model.
result Method outperforms existing methods in non-Gaussian settings and high-dimensional data.
The Gaussian graphical model, a popular paradigm for studying relationship among variables in a wide range of applications, has attracted great attention in recent years. This paper considers a fundamental question: When is it possible to estimate low-dimensional parameters at parametric square-root rate in a large Gau…
Bayesian graphical models are a useful tool for understanding dependence relationships among many variables, particularly in situations with external prior information. In high-dimensional settings, the space of possible graphs becomes enormous, rendering even state-of-the-art Bayesian stochastic search computationally…
The paper shows cross-validation fails in learning Gaussian graphical model structures.
problem Cross-validation's failure in learning Gaussian graphical model structures.
method Finite-sample bounds on misidentification probability of Lasso estimator.
result Cross-validation is inconsistent for learning Gaussian graphical model structures.
Develops methods for constructing parameter priors in DAG models.
problem Constructing parameter priors for model choice among DAG models.
method Introduces assumptions and methods for parameter priors construction and marginal likelihood computation.
result The only parameter prior for complete Gaussian DAG models that satisfies assumptions is the normal-Wishart distribution.
Paper compares two methods for inferring network structures in presence of latent confounders.
problem Inferring network structures in presence of latent confounders.
method Gaussian graphical models with latent variables (LVGGM) and PCA-based removal of confounding (PCA+GGM).
result Proposes a new method combining strengths of LVGGM and PCA+GGM, proving consistency and convergence rate.
The paper efficiently estimates parameters from truncated Gaussian and linear models.
problem Estimating parameters from truncated Gaussian and linear models.
method Minimizes finite population negative log-likelihood function with an l1-regularization term.
result Efficient estimation of parameters from truncated samples.
Two algorithms learn Gaussian graphical models from Glauber dynamics trajectories.
problem Learning Gaussian graphical models from dependent data.
method Two complementary approaches: local edge-testing and burn-in/thinning reduction.
result Both approaches provide finite-sample recovery guarantees and empirical comparisons.
We consider the task of estimating a Gaussian graphical model in the high-dimensional setting. The graphical lasso, which involves maximizing the Gaussian log likelihood subject to an l1 penalty, is a well-studied approach for this task. We begin by introducing a surprising connection between the graphical lasso and hi…
Proposes a method to estimate sparse Gaussian graphical models with hidden clustering structure.
problem Modeling statistical relationships between variables with sparsity and clustering.
method Two-phase algorithm using sGS-ADMM for initial point and pALM for solution.
result Demonstrates good performance and efficiency of the proposed model and algorithm on synthetic and real data.
In this paper, we propose a semiparametric approach, named nonparanormal skeptic, for efficiently and robustly estimating high dimensional undirected graphical models. To achieve modeling flexibility, we consider Gaussian Copula graphical models (or the nonparanormal) as proposed by Liu et al. (2009). To achieve estima…
This thesis studies two problems in modern statistics. First, we study selective inference, or inference for hypothesis that are chosen after looking at the data. The motiving application is inference for regression coefficients selected by the lasso. We present the Condition-on-Selection method that allows for valid s…
We provide a correction to the expression for scoring Gaussian directed acyclic graphical models derived in Geiger and Heckerman [Ann. Statist. 30 (2002) 1414-1440] and discuss how to evaluate the score efficiently.
A new method combines Gaussian graphical models for better distributed Gaussian process predictions.
problem Poor results from traditional DGP due to violated conditional independence assumption.
method Proposes using Gaussian graphical models to aggregate local predictions from subsets of data.
result Our method outperforms other state-of-the-art DGP approaches on both synthetic and real datasets.
Traffic flow forecasting, especially the short-term case, is an important topic in intelligent transportation systems (ITS). This paper does a lot of research on network-scale modeling and forecasting of short-term traffic flows. Firstly, we propose the concepts of single-link and multi-link models of traffic flow fore…
The covariance structure of multivariate functional data can be highly complex, especially if the multivariate dimension is large, making extensions of statistical methods for standard multivariate data to the functional data setting challenging. For example, Gaussian graphical models have recently been extended to the…
Undirected graphical models, or Markov networks, are a popular class of statistical models, used in a wide variety of applications. Popular instances of this class include Gaussian graphical models and Ising models. In many settings, however, it might not be clear which subclass of graphical models to use, particularly…
We develop Square Root Graphical Models (SQR), a novel class of parametric graphical models that provides multivariate generalizations of univariate exponential family distributions. Previous multivariate graphical models [Yang et al. 2015] did not allow positive dependencies for the exponential and Poisson generalizat…
Novel method for learning Gaussian graphical models from paired data.
problem Learning Gaussian graphical models for dependent groups.
method Introducing twin order to explore the search space more efficiently.
result The twin order makes the model space a distributive lattice, leading to more efficient model exploration.
Surveying joint Gaussian graphical models to identify shared structures across domains.
problem Estimating shared structures across different data sources.
method Statistical inference of joint Gaussian graphical models.
result Improved estimation power for high-dimensional data.