We describe a deep learning approach for automated brain hemorrhage detection from computed tomography (CT) scans. Our model emulates the procedure followed by radiologists to analyse a 3D CT scan in real-world. Similar to radiologists, the model sifts through 2D cross-sectional slices while paying close attention to p…
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48 results for “3D CT scanning”
3D U-Net improves kidney and tumor segmentation from CT scans.
problem Manual segmentation by clinicians is laborious and error-prone.
method Multi-scale supervised 3D U-Net with deep supervision and post-processing.
result MSS U-Net achieves high Dice coefficients (0.969 for kidney, 0.805 for tumor) on KiTS19 dataset.
Brain imaging analysis on clinically acquired computed tomography (CT) is essential for the diagnosis, risk prediction of progression, and treatment of the structural phenotypes of traumatic brain injury (TBI). However, in real clinical imaging scenarios, entire body CT images (e.g., neck, abdomen, chest, pelvis) are t…
Six AI solutions accurately detect growth plate planes in mice bone scans.
problem Manual, time-consuming, and variable bone growth plate detection in micro-CT scans.
method Prepared and annotated a dataset of 3D μCT scans, organized a challenge, and developed six computer vision solutions.
result Achieved mean absolute error of 1.91±0.87 planes from ground truth.
Using a Generative Adversarial Network for CT Normalization and its Impact on Radiomic Featureseess.IV
GAN normalizes CT scans for consistent radiomic feature values.
problem Variations in dose levels and slice thickness affect radiomic features sensitivity.
method Used a 3D generative adversarial network (GAN) to normalize reduced dose, thick slice images to normal dose, thinner slice images.
result GAN-based approach led to significantly smaller error in radiomic features.
Nodule2vec: a 3D Deep Learning System for Pulmonary Nodule Retrieval Using Semantic Representationcs.IR
System converts 3D lung nodule images into embeddings for retrieval.
problem Retrieving similar 3D lung nodule images for radiologist decision support.
method 3D deep learning, semantic representation, transfer learning, similarity score.
result System can measure similarity between nodule annotations and CBIR results.
Accurate volume segmentation from the Computed Tomography (CT) scan is a common prerequisite for pre-operative planning, intra-operative guidance and quantitative assessment of therapeutic outcomes in robot-assisted Minimally Invasive Surgery (MIS). 3D Deep Convolutional Neural Network (DCNN) is a viable solution for t…
The development of computed tomography (CT) image reconstruction methods that significantly reduce patient radiation exposure while maintaining high image quality is an important area of research in low-dose CT (LDCT) imaging. We propose a new penalized weighted least squares (PWLS) reconstruction method that exploits …
Non-invasive detection of cardiovascular disorders from radiology scans requires quantitative image analysis of the heart and its substructures. There are well-established measurements that radiologists use for diseases assessment such as ejection fraction, volume of four chambers, and myocardium mass. These measuremen…
Chronic Pulmonary Aspergillosis (CPA) is a complex lung disease caused by infection with Aspergillus. Computed tomography (CT) images are frequently requested in patients with suspected and established disease, but the radiological signs on CT are difficult to quantify making accurate follow-up challenging. We propose …
Deep Learning on Point Clouds for False Positive Reduction at Nodule Detection in Chest CT Scanseess.IV
Paper reduces false positives in lung nodule detection using deep learning on point clouds.
problem Reduces false positives in lung nodule detection.
method Uses deep learning models for point clouds to transform 3D CT scan data.
result Achieved 85.98 FROC compared to 77.26 FROC for baseline models.
Lung cancer is the leading cause of cancer-related death worldwide. Early diagnosis of pulmonary nodules in Computed Tomography (CT) chest scans provides an opportunity for designing effective treatment and making financial and care plans. In this paper, we consider the problem of diagnostic classification between beni…
The state of the art lung nodule detection studies rely on computationally expensive multi-stage frameworks to detect nodules from CT scans. To address this computational challenge and provide better performance, in this paper we propose S4ND, a new deep learning based method for lung nodule detection. Our approach use…
Deep learning predicts SAH patient mortality from initial CT scans.
problem High mortality rates in SAH patients.
method CNN-based algorithm using transfer learning on CT scans.
result Model accurately predicts mortality (74% accuracy, 82% AUC).
3D ConvNets improved with Project & Excite for medical imaging segmentation.
problem Improving segmentation performance in 3D medical imaging.
method Proposed Project & Excite (PE) modules for 3D F-CNNs, extending 2D recalibration methods.
result Project & Excite modules boost segmentation performance up to 0.3 in Dice Score.
Development of a Machine-Learning System to Classify Lung CT Scan Images into Normal/COVID-19 Classeess.IV
System classifies lung CT scans into normal or COVID-19 using machine learning.
problem Detecting COVID-19 infection in lung CT scans.
method MLS with CBA+KE thresholding, feature extraction, selection, and classification.
result SVM with FFV achieved 89.80% detection accuracy.
Disease Detection in Weakly Annotated Volumetric Medical Images using a Convolutional LSTM Networkcs.CV
We explore a solution for learning disease signatures from weakly, yet easily obtainable, annotated volumetric medical imaging data by analyzing 3D volumes as a sequence of 2D images. We demonstrate the performance of our solution in the detection of emphysema in lung cancer screening low-dose CT images. Our approach u…
Automates detection of electric devices in 3D x-ray images of luggage.
problem Detecting electric devices in cluttered 3D baggage images.
method Unpack, Predict, eXtract, Repack (UXPR) algorithm using segmentation and ensemble learning.
result System can accurately detect electric devices in 3D baggage images.
A new COVID-19 CT dataset helps develop AI diagnosis models.
problem Lack of publicly available COVID-19 CT datasets due to privacy issues.
method Built an open-sourced COVID-CT dataset and developed AI diagnosis methods.
result Developed AI diagnosis models achieving high accuracy and performance.
Statistical image reconstruction (SIR) methods are studied extensively for X-ray computed tomography (CT) due to the potential of acquiring CT scans with reduced X-ray dose while maintaining image quality. However, the longer reconstruction time of SIR methods hinders their use in X-ray CT in practice. To accelerate st…
Study assesses CNN model robustness to noise in low-cost CT scans.
problem Evaluate CNN model performance on noisy, artifact-prone low-cost CT images.
method Developed and tested a CNN model for head CT triage, varying tube current and projections.
result Model remains robust to reduced tube current and fewer projections, maintaining AUROC close to original.
Computed tomography (CT) generates a stack of cross-sectional images covering a region of the body. The visual assessment of these images for the identification of potential abnormalities is a challenging and time consuming task due to the large amount of information that needs to be processed. In this article we propo…
A new model improves CT image quality from low-dose scans.
problem Improving CT image quality from low-dose scans.
method Multi-layer Residual Sparsifying Transform (MRST) learning model for low-dose CT reconstruction.
result The MRST model outperforms conventional methods in maintaining subtle details.
Penalized Deep Partially Linear Cox Models with Application to CT Scans of Lung Cancer Patientsstat.ML
Proposes a new model to analyze CT scans for lung cancer patients.
problem Analyzing survival risks of lung cancer patients using CT scans.
method Penalized Deep Partially Linear Cox Model (Penalized DPLC) incorporating SCAD penalty and deep neural network.
result The model effectively selects important texture features and estimates nonparametric components.
For homeland and transportation security applications, 2D X-ray explosive detection system (EDS) have been widely used, but they have limitations in recognizing 3D shape of the hidden objects. Among various types of 3D computed tomography (CT) systems to address this issue, this paper is interested in a stationary CT u…
Deep Efficient End-to-end Reconstruction (DEER) Network for Few-view Breast CT Image Reconstructioneess.IV
DEER network improves few-view breast CT image reconstruction efficiency and quality.
problem Efficient and high-quality few-view breast CT image reconstruction.
method Deep Efficient End-to-end Reconstruction (DEER) network with low model complexity.
result DEER network achieves competitive image quality with significantly fewer parameters compared to state-of-the-art methods.
Different types of Convolutional Neural Networks (CNNs) have been applied to detect cancerous lung nodules from computed tomography (CT) scans. However, the size of a nodule is very diverse and can range anywhere between 3 and 30 millimeters. The high variation of nodule sizes makes classifying them a difficult and cha…
Scientific imaging techniques such as optical and electron microscopy and computed tomography (CT) scanning are used to study the 3D structure of an object through 2D observations. These observations are related to the original 3D object through orthogonal integral projections. For common 3D reconstruction algorithms, …
Creating large scale high-quality annotations is a known challenge in medical imaging. In this work, based on the CycleGAN algorithm, we propose leveraging annotations from one modality to be useful in other modalities. More specifically, the proposed algorithm creates highly realistic synthetic CT images (SynCT) from …
AI tool automates blood segmentation from head CT scans after SAH.
problem Accurate volumetric assessment of SAH patients for clinical and prognostic implications.
method Transformer-based Swin UNETR architecture for noncontrast CT scans.
result High accuracy and robust performance across internal and external validation cohorts.
Computed Tomography (CT) reconstruction is a fundamental component to a wide variety of applications ranging from security, to healthcare. The classical techniques require measuring projections, called sinograms, from a full 180 view of the object. This is impractical in a limited angle scenario, when the viewi…
This work is an endeavor to develop a deep learning methodology for automated anatomical labeling of a given region of interest (ROI) in brain computed tomography (CT) scans. We combine both local and global context to obtain a representation of the ROI. We then use Relation Networks (RNs) to predict the corresponding …
Over half a million individuals are diagnosed with head and neck cancer each year worldwide. Radiotherapy is an important curative treatment for this disease, but it requires manual time consuming delineation of radio-sensitive organs at risk (OARs). This planning process can delay treatment, while also introducing int…
Unlike previous works, this open data collection consists of X-ray cone-beam (CB) computed tomography (CT) datasets specifically designed for machine learning applications and high cone-angle artefact reduction. Forty-two walnuts were scanned with a laboratory X-ray set-up to provide not only data from a single object …
A network removes irrelevant structures from chest radiographs for better analysis.
problem Clutter in chest radiographs hinders visual inspection and analysis.
method Fully Convolutional Network to suppress undesired visual structure.
result Improved classifier performance with limited training data.
We present a self-supervised approach to training convolutional neural networks for dense depth estimation from monocular endoscopy data without a priori modeling of anatomy or shading. Our method only requires monocular endoscopic videos and a multi-view stereo method, e.g., structure from motion, to supervise learnin…
Machine learning models for COVID-19 detection and prognosis from chest images are flawed and unreliable.
problem Developing reliable machine learning models for COVID-19 diagnosis and prognosis from chest images.
method Systematic review of machine learning models published in 2020.
result None of the models identified are of clinical use due to methodological flaws and biases.
Deep learning improves plaque prediction for coronary artery health.
problem Predicting coronary artery plaque health from CT scans.
method 3D RCNN, 2D multi-view ensemble, 2.5D approach.
result Improved prediction accuracy for revascularization decisions.
We introduce SparseVM, a method that registers clinical-quality 3D MR scans both faster and more accurately than previously possible. Deformable alignment, or registration, of clinical scans is a fundamental task for many clinical neuroscience studies. However, most registration algorithms are designed for high-resolut…
Surrogate-free machine learning-based organ dose reconstruction for pediatric abdominal radiotherapyphysics.med-ph
A ML-based method reconstructs 3D organ doses from 2D radiographs for pediatric abdominal radiotherapy.
problem Reconstructing detailed 3D dose distributions for childhood cancer survivors using limited 2D radiographs.
method Surrogate-free ML approach using 142 abdominal planning CTs, 300 artificial plans, and evolutionary algorithm.
result Accurate 3D dose reconstructions with MAEs ≤ 1.7 Gy for edge organs, validated on independent dataset.
Automatic segmentation of auditory ossicles from CT images using Ricci curvature.
problem Automatic diagnosis of ossicles' diseases from 3D CT images of the head.
method Proposes a completely automatic method that locates and segments ossicles without manual labels or templates, using Ricci curvature in an energy function.
result Performance of the proposed method using discrete Forman-Ricci curvature is superior to state-of-the-art methods.
Deep learning and radiomics methods assess coronary artery plaque from CT scans.
problem Improving patient management and clinical outcomes by assessing coronary artery plaque.
method Three machine learning approaches: radiomics, deep learning, and fusion of both.
result Methods achieve AUC scores of 0.84-0.88, comparable to FFR measurements.
Deep Learning approaches for solving Inverse Problems in imaging have become very effective and are demonstrated to be quite competitive in the field. Comparing these approaches is a challenging task since they highly rely on the data and the setup that is used for training. We provide a public dataset of computed tomo…
Pattern recognition methods using neuroimaging data for the diagnosis of Alzheimer's disease have been the subject of extensive research in recent years. In this paper, we use deep learning methods, and in particular sparse autoencoders and 3D convolutional neural networks, to build an algorithm that can predict the di…
In this paper, we present UNet++, a new, more powerful architecture for medical image segmentation. Our architecture is essentially a deeply-supervised encoder-decoder network where the encoder and decoder sub-networks are connected through a series of nested, dense skip pathways. The re-designed skip pathways aim at r…
Cardiovascular disease (CVD) is the global leading cause of death. A strong risk factor for CVD events is the amount of coronary artery calcium (CAC). To meet demands of the increasing interest in quantification of CAC, i.e. coronary calcium scoring, especially as an unrequested finding for screening and research, auto…
A novel approach for 3D lung nodule segmentation using adaptive ROI and multi-view residual learning.
problem Inaccurate nodule segmentation due to fixed ROI and redundant structures.
method Two-stage approach: 2D ROI patch-wise investigation with adaptive ROI strategy, followed by 2D and 3D VOI investigation with deep residual U-Net.
result Significantly robust and accurate nodule segmentation compared to previous methods.
Computed tomography (CT) examinations are commonly used to predict lung nodule malignancy in patients, which are shown to improve noninvasive early diagnosis of lung cancer. It remains challenging for computational approaches to achieve performance comparable to experienced radiologists. Here we present NoduleX, a syst…